Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0965 ATGGATTTGGTGGGACCCACCATGACCAGATTGATAGGGGACTACATACTTGGTCCACGAATCGGGTCAGGTTCATTTGCAGTGGTGTGGCGTTCACGTCATCGAAATTCAGGTTTGGAGGTAGCAATTAAGGAAATTGATAAGACCCAATTGAGTTCTAAAGTTAGAGATAATCTCATCAAAGAGATTTCAATTCTTAGTACTATTCATCATCCTAACATTGTTAGACTCTTTGAAGCTATTCAGACGAATGAGAGGATTTATCTTGTTTTGGAGTATTGTGGTGGAGGGGATCTTGCTGCTTATATTCAGCGATATGGGAGAGTTTCTGAATCTGTTGCTAGACATTTCATGAGGCAGTTGGCGGCCGGGTTGCAGGTGCTTCAAGAAAAGAACCTTATACATAGAGATTTAAAACCACAGAACTTACTGTTGGCAACTACTTCAGCTACACCACTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCTCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATAATTCAGAGTCAGAAGTATGATGCCAAGGCAGACTTGTGGAGTGTTGGTGCTATATTGTATCAGCTAGTTGTTGGGAAACCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATATTGGCATCTACTGAACTGCACTTTCCACCAACGATTTTAAAAGAGCTACATTCTGATTGTGTGGATCTTTGCAGAAGCCTTTTACGTCGAGATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTACAAGAACAGAGGTCCGTCTTGAACATCGAGCAGTTTCATTCACATCAATCAGAAAGCTCAACGGTTAATCAATTGGTCAGCTCCAGTGGTAGTCAGTTTCAAGCACGTTCCGAGTATCATGTCGAGTCATTTGTAGATGATCCAGTGGCAGTCAGTTCGGCGGTCAATGAAACCATGCTTTTGCAAAGAATGGGAGGCAAGATCACAGCTGACACTAAAAGTGCTAAAGGGTCCGTTGATACTGATATTCATTTGTCAAACCAAGCTCGAGTTTCACATTTAATGGAGTCCATTGAGAAAGGTTATGTCCTCATCAATCCTCATTTTACATCATTGGAGGATTTCTCTGACTACTTTGAGGCGTCTGTGCATGATAATCCCTCAAGCGGCGGTGTTTCTATCTGTCCTTCAAAGGGGACTAACCTGGAGATTGGAAAGCAAACTAAGGATCCGTCGTCTTCTTCAACTGATGGGTTAGACAATTTTAAAAGCAATGAACTCGAGGCATTTGTGGCATCCTGTGAAGTTGCTACCTTAAGGAAAGAGCAAGAATTTTCTTTACTGCACCCTTCAAACAGGTTAGAGTTGTTGCATCAGTATGTGCAAGTCCTTGGAGAAATTTCGCAAGAAAAGTATAACACGGGATTGTATCTAGAATCTCTTGCGGTGGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGACATTTGTAGCACTTGGTTAGTCCCCATTTCTGAGGGTGAGTTGCATGGAAACAGTTCAGTTAATGAGTCCACAATTACCGGTGGAGAAGCGAGCTTATCGCAGACTACGGAACAGAAAATAAATTTTAGTGACCATTCTTCCGTCTCTTTGTGGGCCAAACATGGATTTATCATTGCAGTCGATCGTGCTGAGAAACTATCATGTCATATTCAAAACATGGATGGTGCAGTTGAGATGCCAGATGCAATGGAGATTATATTCCAACAAGCACTCCTTGTTGGGACAAATGCTGCTGTAGATGAGTACATGAATAACAAAGATAAGTCTGCTGCATCTTACTCAAAAGCAATGCTTCTACTTTCATTTATTGTGGGAGAAGCAGAGAACCTTCCACTGAATCCTCCATTTTCACTTCTTGCCGATGATCAGAAGCGAATCGTGCAATATATTCACAACTTGCAGTTTCACAAAAAGTCTCTGTCAGAGTCTGCTTCAAAGGAATCCCATGCTCTTTCGCGAACGTAA 2052 0.4162 MDLVGPTMTRLIGDYILGPRIGSGSFAVVWRSRHRNSGLEVAIKEIDKTQLSSKVRDNLIKEISILSTIHHPNIVRLFEAIQTNERIYLVLEYCGGGDLAAYIQRYGRVSESVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPPTILKELHSDCVDLCRSLLRRDPDERLTFKAFFNHNFLQEQRSVLNIEQFHSHQSESSTVNQLVSSSGSQFQARSEYHVESFVDDPVAVSSAVNETMLLQRMGGKITADTKSAKGSVDTDIHLSNQARVSHLMESIEKGYVLINPHFTSLEDFSDYFEASVHDNPSSGGVSICPSKGTNLEIGKQTKDPSSSSTDGLDNFKSNELEAFVASCEVATLRKEQEFSLLHPSNRLELLHQYVQVLGEISQEKYNTGLYLESLAVELVVLAIWKKALDICSTWLVPISEGELHGNSSVNESTITGGEASLSQTTEQKINFSDHSSVSLWAKHGFIIAVDRAEKLSCHIQNMDGAVEMPDAMEIIFQQALLVGTNAAVDEYMNNKDKSAASYSKAMLLLSFIVGEAENLPLNPPFSLLADDQKRIVQYIHNLQFHKKSLSESASKESHALSRT* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0965 683 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0965 683 PANTHER BNAC06G18300D PROTEIN 445 659 - -
Mal5g0965 683 PANTHER BNAC06G18300D PROTEIN 9 304 - -
Mal5g0965 683 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Mal5g0965 683 Gene3D Transferase(Phosphotransferase) domain 1 7 351 - -
Mal5g0965 683 SUPERFAMILY Protein kinase-like (PK-like) 11 310 IPR011009 -
Mal5g0965 683 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0965 683 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0965 683 CDD STKc_ATG1_ULK_like 21 272 - -
Mal5g0965 683 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 445 659 IPR045269 GO:0004674|GO:0006914
Mal5g0965 683 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 304 IPR045269 GO:0004674|GO:0006914
Mal5g0965 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Mal5g0965 683 MobiDBLite consensus disorder prediction 400 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0965 Mal-Chr5 16925913 16931292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0965 7 303 CBL-interacting serine-threonine protein kinases AT4G14580 37.658 9.77e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mal5g0965 Pkinase 4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0965 - K08269 mtr:MTR_8g024100 1189.87