Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0964 ATGTTTAATGTTGTTGTCCTCATGACATCTTTTGTTACTGTCCTTTTTGCACTTCTTTTGTTCTTTCCTTTAACTTCTTCTCTCCAACAAGTGCAAACAAAACTAGTTGAACCACCTTTGCTTCCACAAAATTCATGCAATGAAACATGTGGAAAACTCCATGTTCCTTTTCCATTTTACATCAACAACACTTCATGTGCATCATTATCAAGTTCTTTCCACCTCACTTGTTCAAATTCTTCCACACTTTTGATCAAAATAGGTTCACAAAACTATCCCATTTTGGAATTCTTTTCAGATGGTTTGTTAGTAGACTTTCCCGGCACATCGTCGTGTCGACAGTATAATGATTTGAATTCATTTGGTGAGAGAAGTTTTGATGGAAAAAACTACTTTGGTGTATCAGTTGATAATATTGTTGGTCTTTATGATTGTGAAGATTCTTCACTTTGTAAAGCTGATTGTGAAACAGTTAACCTTCCTGGTTGTGATGGAAGTTTTGGTGGTGGTTCTCTTGGATGTTGTTATCCACTTTCTGATCATAGTATATGGCATATTGGTGAAGGTTTTTCTGTTTTTTCTCAGTTTGGATGCAGAGGATTTTCTAGTTGGGCTGTTATAAGAGGGTCTTATTCAGGAAAAAGAGGGGTAAAATTGGAATTTGCTATTCCTAGGAACTTTTCTAAGGAGATTTGTGCTAAGAATGGGGATATTGTAAATGCTACATCAATTAAAGATGGCATAAGGTGTGTTTGTCAAGATGGATATGTTGGTGATGGTTTTGCTAATGGAACAGGTTGCTTACTATCCTGTATCAAGGATGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGATCAAAGAAAAATGGTTATCATTGCTGGAATCCTTTGTCCAGTTCTTATTGTGGCCTCCTTAGTTACACTATTCTATCTTCTAAAAAGAAAACAAAAGCCAGGAATGTTCGATTCCGAACAAGCTTATTACCACAACATTTCGTTCCGAAAAGCATGTAGAACTCGACTATTCAGCCACCTTGAGCTAGAGGAAGCCACCAATGGTTTTGAAGAAAACAGAAAACTCATGCAATGCAATAACAGCACAATGTTTGCTGGTGTTCTTGGTGATGGATCACATGTAGCTATACACAAGTTATTAAAATGTGAGAATGAAAAAGACATGATGCAAGTCATGTCACAAATTGAAGTCCTATCTGCAATTGTACATAGAAATGTTGCATCAATTCTTGGTTGTTGCATTGATTCTAGCTACACTCCTCTAGTGGTTTATGAGTATCCTTCAAATGGTACCTTAGAGGATCATTTACACCAAAAGTTCCAAAACAAAGGGCAAAAACTTGGTTTAGATTGGTATAGGAGATTGAATATTGCAACAGAAATAGCTAGTACTATTGCATTGTTACATTATGATAAATCACCTCCAATATTTCATCATAACTTAAAGTCTAGTTGCATTTTCCTAGATGATGATTTTTCAGTCAAGGTTGCAGGATTTGAGCTAGTTAATTATGATCACAAGAATTGTGAAAATCGCGAACGCTTTCGCTTGTGCAAAAACGATGTCTATGACATAGGTGTGTTGCTACTTGAGATTATCTATGGAAAAAATCAAGTGGACTCACCTACATTAGCATTGAAGAAAATTAGAGATGGAAAGATTGAAGAAATTGTTGATCCACTTCTTAATTATCACGAACAGCCGCGTCATTGTCAAGAACAGATTCAAGTCATTGCTGATCTTGCCACTAGATGTTTGCTGTTTGGTGGAGATGGAAAGATGGGGATGATTGATGTTGCTAGGGAATTGGTTCATTTGACAAAAGATAGTGTTGATGGTGGAAATGTGAAAGGAATTGTTCTTGAAGAAACATTCTCAAATTCTAGTCTTCTTCAAATGATATCTTTGTCTCCTGATTCTATGCATGTTCCTTGA 1962 0.3619 MFNVVVLMTSFVTVLFALLLFFPLTSSLQQVQTKLVEPPLLPQNSCNETCGKLHVPFPFYINNTSCASLSSSFHLTCSNSSTLLIKIGSQNYPILEFFSDGLLVDFPGTSSCRQYNDLNSFGERSFDGKNYFGVSVDNIVGLYDCEDSSLCKADCETVNLPGCDGSFGGGSLGCCYPLSDHSIWHIGEGFSVFSQFGCRGFSSWAVIRGSYSGKRGVKLEFAIPRNFSKEICAKNGDIVNATSIKDGIRCVCQDGYVGDGFANGTGCLLSCIKDGKEAYGSDCYIKRHDQRKMVIIAGILCPVLIVASLVTLFYLLKRKQKPGMFDSEQAYYHNISFRKACRTRLFSHLELEEATNGFEENRKLMQCNNSTMFAGVLGDGSHVAIHKLLKCENEKDMMQVMSQIEVLSAIVHRNVASILGCCIDSSYTPLVVYEYPSNGTLEDHLHQKFQNKGQKLGLDWYRRLNIATEIASTIALLHYDKSPPIFHHNLKSSCIFLDDDFSVKVAGFELVNYDHKNCENRERFRLCKNDVYDIGVLLLEIIYGKNQVDSPTLALKKIRDGKIEEIVDPLLNYHEQPRHCQEQIQVIADLATRCLLFGGDGKMGMIDVARELVHLTKDSVDGGNVKGIVLEETFSNSSLLQMISLSPDSMHVP* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0964 653 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 55 648 IPR045274 GO:0007166
Mal5g0964 653 Pfam Protein tyrosine and serine/threonine kinase 371 516 IPR001245 GO:0004672|GO:0006468
Mal5g0964 653 Pfam Wall-associated receptor kinase galacturonan-binding 46 97 IPR025287 GO:0030247
Mal5g0964 653 SUPERFAMILY Protein kinase-like (PK-like) 341 612 IPR011009 -
Mal5g0964 653 Gene3D Transferase(Phosphotransferase) domain 1 437 523 - -
Mal5g0964 653 Gene3D Transferase(Phosphotransferase) domain 1 524 625 - -
Mal5g0964 653 PANTHER OS10G0351500 PROTEIN 55 648 - -
Mal5g0964 653 ProSiteProfiles Protein kinase domain profile. 358 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0964 653 Gene3D Phosphorylase Kinase; domain 1 330 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0964 Mal-Chr5 16916714 16919738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0964 46 615 Receptor kinase-like Gene Family AT2G23450 28.871 3.56e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Mal5g0964 PK_Tyr_Ser-Thr 4.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0964 - - gmx:100810557 904.82