Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0958 ATGACAACCTCTTTTCCTTTCATTCATGATTCTCTTCCTGTTGGATTCAGATTTTGTCCAACAGGTGAAGAGCTAGTTCACCACTACCTCAGAAACAAGTTGCTTGGTAATGACGCCATTGTAAACAACGTTATAGCTGAAGTTGATATTTGCAAGTTCGAACCTTCGGACTTATCCGCTTGTTCTGCGATAAAATCTGATGATCCGGAATGGTTTTTCTTGTGTCCTATTAATTACAAATATGCAAAGAGTAAAAGGATTGATAGGACTACAAAAAATGGTTTTTGGAAAGCTACAGGAAAGGACAGGAACATTAAGATTAGGGGAACCAATGAAGTTATTGGGATTAAGAAGACTCTTGTTTACCATGAAGATTCTGTTCCTGTTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGCCACTTTTGATGATCACCAGGTATGTGCTTCCCCTGAATTGAATATGGAATCTATCTTAGCATCACCTATGCCAGAGGAGAACAGTCTCCTTCCACTACTAAAACCTGCCACTGATCAGACACCATATTTCCAAGGTGCATGTCTTGAGAACAAAAACAACATTGGACTTAATCTAGATGAAGCTTTTGAAGAGGACAATGCTGATTATTCTTCGTACTTTGATTAA 651 0.381 MTTSFPFIHDSLPVGFRFCPTGEELVHHYLRNKLLGNDAIVNNVIAEVDICKFEPSDLSACSAIKSDDPEWFFLCPINYKYAKSKRIDRTTKNGFWKATGKDRNIKIRGTNEVIGIKKTLVYHEDSVPVVKTNWIIHEYHDATFDDHQVCASPELNMESILASPMPEENSLLPLLKPATDQTPYFQGACLENKNNIGLNLDEAFEEDNADYSSYFD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0958 216 Gene3D NAC domain 21 161 IPR036093 GO:0003677|GO:0006355
Mal5g0958 216 ProSiteProfiles NAC domain profile. 12 163 IPR003441 GO:0003677|GO:0006355
Mal5g0958 216 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Mal5g0958 216 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 14 154 - -
Mal5g0958 216 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 154 - -
Mal5g0958 216 SUPERFAMILY NAC domain 4 146 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0958 Mal-Chr5 16777400 16781280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0958 10 140 NAC Transcription Factor Family AT4G35580 56.061 3.18e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal5g0958 NAM 4.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0958 - - mtr:MTR_8g023900 241.891