Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0949 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTGTTGCCATCTCTCCAAGTTCCCAGAAGAATGGATCATCCATGGGAACCTCAAAAGCTTTTCTTGGAAGGAAACTGAAGGTGAACAGCAACACAGCAGCACCAGTTAGAGTGAGGTCTACAACAACAGTGTGCACAGTAGCTGAGCCTGATAGACCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGATTTTGGATTTGATCCTCTTGGACTTTCATCTGATCCAGAGAGTCTGAAATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGAGCAGCAGGAATTTTCATCCCAGAATTCCTAACAAAGATTGGTATCTTGAACACACCTTCATGGTACACTGCTGGAGAGCAAGAGTATTTCACAGACACTACAACACTCTTCATAGTTGAGCTCCTTTTCATCGGTTGGGCCGAGGGTAGAAGATGGGCCGACATACTCAATCCAGGTTGTGTCAACACTGACCCTATCTTTCCCAACAACAAGCTCACAGGAACTGATGTAGGGTACCCTGGTGGACTTTGGTTTGATCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTTAAGGAGTTGAGAACAAAGGAAATTAAGAATGGTAGATTGGCTATGTTGGCTGTGATGGGAGCTTGGTTCCAGCACATTTACACTGGAACTGGTCCTATTGATAACCTCTTTGCTCACCTTGCTGATCCTGGTCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 807 0.4709 MASACASSAIAAVAISPSSQKNGSSMGTSKAFLGRKLKVNSNTAAPVRVRSTTTVCTVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELLFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0949 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Mal5g0949 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Mal5g0949 268 SUPERFAMILY Chlorophyll a-b binding protein 59 266 - -
Mal5g0949 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 268 - -
Mal5g0949 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 268 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0949 Mal-Chr5 16691322 16693749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0949 45 268 Chloroplast and Mitochondria Gene Families AT3G61470 88.889 9.05e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0949 K08908 - gmx:100784089 493.426