Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0936 ATGCCGCCGACTCCTCCCATTCTCAAGCTCGCCAGAGACAATGAGATTGTTAAGTACGAAGTACGTCTTGATGATGGAACACTTGTAAAAAAATCTGATGGGGTGGAGTTCACAGTCAAGGATGGTCATTTTTGTCTTGCATTGTCAAAGGCTGTTAAAACCATGAACAAGGGAGAGAAAGTGATTTTGGTTGTGAAGCCCCAATATGGATTTCGTGAAAAGGGCAAGCCAGCTCACGGTGATGAAGGTTCAGTTCCACCTAATGCAACATTCCAGATTACTCTCGAGTTAGTTTCTTGGAAGACTGTTTCTAAAGTAACCGTTGATAAGAAGGTCATCATGGATGAATTGTTTTCAGAACGCCCTTGTTTTGTACGCAAAGGGAAAGAGATTGTGAAACTAATTGGTAAGCTGCAAGATGGTACTGTATTTTTTAAGAAAGGCTACAATGATGGTGAAGCAGAGCTTTTTGAATTTAAAACAGACGATGGTAATTTGAATTTTCCCAATGTGTCACCCTCACATTAA 528 0.4053 MPPTPPILKLARDNEIVKYEVRLDDGTLVKKSDGVEFTVKDGHFCLALSKAVKTMNKGEKVILVVKPQYGFREKGKPAHGDEGSVPPNATFQITLELVSWKTVSKVTVDKKVIMDELFSERPCFVRKGKEIVKLIGKLQDGTVFFKKGYNDGEAELFEFKTDDGNLNFPNVSPSH* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0936 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 12 131 - -
Mal5g0936 175 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 17 97 IPR001179 GO:0003755
Mal5g0936 175 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 12 101 IPR001179 GO:0003755
Mal5g0936 175 Gene3D - 10 101 IPR046357 GO:0003755
Mal5g0936 175 PANTHER PEPTIDYLPROLYL ISOMERASE 12 131 - -
Mal5g0936 175 SUPERFAMILY FKBP-like 16 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0936 Mal-Chr5 16394225 16396339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0936 17 166 Calmodulin-binding Proteins AT3G25230 30.380 3.25e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0936 K09571 - mtr:MTR_8g023740 227.639