Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0929 ATGAAATCAACATCAAATCAACCCTTCAACCCTTGTTCAAAAAACTACATATTTTTCTCCAAACTAATGTCCTCTTTCAAAAAAACAACCTTTTTTCTAACCTTATTCATTGTCCATGTCTCTTCTTCTTGTAACCAACAAGACAAAGATTCTCTTTTGTCTTTCTCTTCAAATTTCTCAACTTTTTCAACTCACCCACCTCTTAACTGGTCTTCTTCCATTGATTGTTGCAGTTGGGAAGGTATAACTTGTGATCAACAAAATCACCATGTTACACATCTTTTGTTACCTTCTAGAGGACTCACTGGTTTCTTTTCACTTTCTTTTATCACTTCACTTCAATCTCTTTCTCATCTTAATCTCTCACATAATAAACTTTATGGTAATCTTCAAAATCAGTTTTTTGAACTTGTTAATCATCTTTTAGTCCTTGATTTGAGTTATAATCAATTCTCTGGTGAATTACCAACTTTTGTTAATGGAAATGGAAATAGCAGTGTTATTCAGGAGGTGGATTTGTCTAGTAATTCATTCAATGGAACATTGCCAGTTTCTCTGATTCAGAATCTTGTAGAAGGTGGAAATTTGATTTCTTTCAATGTAAGTAACAACAGTTTCACAGGTCAAATTCCAATTTCAATCTTTTGTGTTAATGAATTGAACAATTCTGCTATAAGATTCTTGGATTATTCTTCCAATGATTTTGATGGTAATATTGAGACTGGTTTAGGAGCATGTTCTAAGCTTGAGAGATTTAGGGCAGGTTTCAATAATCTATCAGGGAATATACCAATTGATATCTATGATGCTGTTTCACTCATTGAGATATCACTGCCACTTAATAGGATTGTTGGAACAATTGGTGATGGAATTGTTAATCTTGTCAATCTCACTGTTTTGGAGCTTTATTCCAATCATTTGATAGGTCCTATTCCTAGGGATATTGGTAGACTTTCCAAATTGGAAAAGTTGCTTCTTCATGTGAATAATTTGACTGGTACAATTCCACCATCTTTGATGAATTGTAACAATCTCGTTGTGTTGAATTTGAGGGTGAATAAATTGGAAGGAAATCTTTCGGCGTTCAATTTCTCGGGATTTGGAAGACTTGTTACGCTTGATCTTGGTAACAATAATTTTACCGGTGTTTTACCGCCGACCCTTTATGATTGCAAATCACTTGCAGCATTAAGGCTTGCAACTAATCAACTTGAGGGACAGGTTTCATCGGAGATACTTGGACTTGAGTCTCTTTCGTTCTTATCGATTTCTAATAACAGGTTGAAGAATATCACTGGTGCTCTTAAAATACTCACTGGCCTTAAGAAGCTCAGTACCCTAATGCTCTCGAAGAATTTTTACAATGAAATGATACCACACGGTGTGAACATCATAGACCCTGATGGATTCCAAAATATTCAAGTTTTAGGGTTAGGTGGTTGTAATTTCACAGGTCAGATACCAAGTTGGCTTGAAAATTTGAAGAAGCTTGAGGCCCTAGACCTGTCCTTTAATCGATTCAGTGGTTCAATTCCTCCTTGGTTAGGTAAACTTCCTCAGCTTTTCTACATAGACCTGTCTGTTAACATACTTACGGGCCTGTTTCCGATAGAGCTCACGAAACTCCCGGCACTAGCATCGCAACAAGCAAATGATAAAGTAGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCCAACAATGTTTCGTTGTTGCAATACAATCAACTTTCAAGCCTACCTCCGGCGATATATCTAGGAACCAATCACCTTAGTGGCAGTATCCCGAGTGAGGTTGGTCAATTGAAAGCCCTTCATCAGCTTGACCTGAAGAATAACAACTTCTCTGGCAATATACCGGATCAAATTTCAAACTTGATTAACTTAGAGAAACTAGACCTCTCAGGAAACAACCTATCCGGTGAAATTCCTGTTTCACTCAATAGATTACATTTCTTGTCCTTTTTCAGTGTAGCAGACAATAATCTTCAAGGTCGGATACCAACTGGTGGACAGTTTGATACTTTTTCCAACACCAGCTTTGAAGGAAACTCGCAATTGTGTGGTTTGGTTATTCAGCACCCTTGTTCTTCTCAACAAAATACTACTGGTACTTCAGCTAGTGGCAAATCCCGCAAGAAAATAATATTAATACTTATTATCACTGTCTCTTTCGGCATTGCTACCTTGATAACATTGTTGACACTGTGGATACTATCCAAGAGAAGGGTCAATCCAAGAGGAGATTCTGATAAGATTGAACTTGAATCAATTTCCCCGTACTCGAACAGTGGCGTTCATCCTGAGATTGATAAGGAGGCTAGCCTAGTGGTATTGTTTCCAAACAAAAATAATGAAACCAAGGATCTTTCCATATTAGAGATCATAAAAGCCACTGATCATTTCAGTCAGGCGAATATAATAGGATGTGGCGGTTTTGGTTTGGTTTATAAAGCATCATTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTGGGCCTTATGGAAAGGGAATTTAAAGCAGAAGTTGAGGCTTTGTCAACAGCACAACATGAGAATTTGGTATCATTGCAAGGCTACTGTGTGCACGATGGTTATCGGCTACTCATATATAATTACATGGAGAATGGAAGTCTCGATTACTGGCTGCACGAAAAGTCTGATGGTGCGTCTCAACTTGATTGGCCGACTCGTTTGAAGATCGCACAAGGAGCAGGTTGTGGTTTGGCCTATTTGCATATGATATGTGATCCGCACATCGTACACCGCGATATAAAGTCAAGTAATATACTCCTCAACGAGAAGTTTGAGGCGCGCGTTGCTGATTTCGGGTTGTCGCGGTTGATTCTTCCGTATCAGACTCATGTTACGACGGAACTTGTAGGTACATTAGGTTACATTCCCCCGGAGTATGGGCAAGCATGGGTGGCTACTCTTAGGGGAGATGTGTACAGCTTTGGTGTTGTTATGCTTGAGCTTCTCACTGGAAGGAGACCTATGGATGTATGCAAGCCTAAAATTTCAAGGGAGCTGGTCAGTTGGGTTCAACAGATGAAAAATGAAGGAAAACAAGAACAAGTATTTGACTCGAACCTTCGGGGGAAAGGCTTTGAAGAAGAGATGCTGCAGGTACTTGATGTAGCATGCATGTGTGTTAATATGAATCCTTTCAAGAGACCAACCATCAGAGAAGTTGTTGAATGGCTCAAGAATGTTCACAGAAATAAAGATTAA 3249 0.3857 MKSTSNQPFNPCSKNYIFFSKLMSSFKKTTFFLTLFIVHVSSSCNQQDKDSLLSFSSNFSTFSTHPPLNWSSSIDCCSWEGITCDQQNHHVTHLLLPSRGLTGFFSLSFITSLQSLSHLNLSHNKLYGNLQNQFFELVNHLLVLDLSYNQFSGELPTFVNGNGNSSVIQEVDLSSNSFNGTLPVSLIQNLVEGGNLISFNVSNNSFTGQIPISIFCVNELNNSAIRFLDYSSNDFDGNIETGLGACSKLERFRAGFNNLSGNIPIDIYDAVSLIEISLPLNRIVGTIGDGIVNLVNLTVLELYSNHLIGPIPRDIGRLSKLEKLLLHVNNLTGTIPPSLMNCNNLVVLNLRVNKLEGNLSAFNFSGFGRLVTLDLGNNNFTGVLPPTLYDCKSLAALRLATNQLEGQVSSEILGLESLSFLSISNNRLKNITGALKILTGLKKLSTLMLSKNFYNEMIPHGVNIIDPDGFQNIQVLGLGGCNFTGQIPSWLENLKKLEALDLSFNRFSGSIPPWLGKLPQLFYIDLSVNILTGLFPIELTKLPALASQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNHLSGSIPSEVGQLKALHQLDLKNNNFSGNIPDQISNLINLEKLDLSGNNLSGEIPVSLNRLHFLSFFSVADNNLQGRIPTGGQFDTFSNTSFEGNSQLCGLVIQHPCSSQQNTTGTSASGKSRKKIILILIITVSFGIATLITLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEIDKEASLVVLFPNKNNETKDLSILEIIKATDHFSQANIIGCGGFGLVYKASFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVSLQGYCVHDGYRLLIYNYMENGSLDYWLHEKSDGASQLDWPTRLKIAQGAGCGLAYLHMICDPHIVHRDIKSSNILLNEKFEARVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPMDVCKPKISRELVSWVQQMKNEGKQEQVFDSNLRGKGFEEEMLQVLDVACMCVNMNPFKRPTIREVVEWLKNVHRNKD* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0929 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Mal5g0929 1082 PANTHER OS06G0692500 PROTEIN 24 1078 - -
Mal5g0929 1082 Gene3D Ribonuclease Inhibitor 343 705 IPR032675 -
Mal5g0929 1082 SMART serkin_6 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0929 1082 SUPERFAMILY L domain-like 43 220 - -
Mal5g0929 1082 SUPERFAMILY L domain-like 470 689 - -
Mal5g0929 1082 Pfam Leucine rich repeat 369 428 IPR001611 GO:0005515
Mal5g0929 1082 Pfam Leucine rich repeat 472 529 IPR001611 GO:0005515
Mal5g0929 1082 Pfam Leucine rich repeat N-terminal domain 46 85 IPR013210 -
Mal5g0929 1082 Pfam Protein tyrosine and serine/threonine kinase 806 1073 IPR001245 GO:0004672|GO:0006468
Mal5g0929 1082 Pfam Leucine Rich Repeat 629 648 IPR001611 GO:0005515
Mal5g0929 1082 ProSiteProfiles Protein kinase domain profile. 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0929 1082 SUPERFAMILY RNI-like 170 541 - -
Mal5g0929 1082 Gene3D Transferase(Phosphotransferase) domain 1 879 1082 - -
Mal5g0929 1082 Gene3D Ribonuclease Inhibitor 268 342 IPR032675 -
Mal5g0929 1082 Gene3D Ribonuclease Inhibitor 47 165 IPR032675 -
Mal5g0929 1082 SMART LRR_typ_2 294 318 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 603 626 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 367 391 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 494 518 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 415 437 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 627 651 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 113 137 IPR003591 -
Mal5g0929 1082 SMART LRR_typ_2 138 162 IPR003591 -
Mal5g0929 1082 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Mal5g0929 1082 SUPERFAMILY Protein kinase-like (PK-like) 789 1074 IPR011009 -
Mal5g0929 1082 PANTHER LEUCINE RICH REPEAT KINASE 2 24 1078 - -
Mal5g0929 1082 Gene3D Ribonuclease Inhibitor 166 267 IPR032675 -
Mal5g0929 1082 ProSiteProfiles Leucine-rich repeat profile. 629 652 IPR001611 GO:0005515
Mal5g0929 1082 Gene3D Phosphorylase Kinase; domain 1 768 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0929 Mal-Chr5 16132353 16135601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0929 31 697 Miscellaneous Gene Families AT1G17240 53.640 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mal5g0929 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0929 - - gmx:100781943 1615.51