Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0924 ATGTCGGTGGATCCATGGTTGATGCTGATGCTGATGTTCATCAGTAGCTGTACTTATGTCATCAATGGTGACACAGATCCAAGTGATGTCTCTGCTTTAATGGCTCTGTTTCAAAGTATGAACTCACCGCCCCAGCTAAATTGGCCGGCCAATGGTAACGATCCTTGTGGACAGTCTTGGACAGGCATCACTTGCTCAGGCAACCGAATCACCGAAATTAAGTTACCTGGTCATCAGCTAACCGGAACTTTGGGTTTCCAGCTACAATCCTTGTCATCTGTGACTAACCTAGATTTAAGTAACAACAATCTTGCTGGCAATCTACCGTACCAGTTTCCTCCAAATTTGCAGCGCTTAAATCTTGCTAATAACAATTTCAATGGGGGGATACCTTATTCTTTTTCTGATACTCCTTCTCTTATAAGCCTGAATCTTGGTCACAATCAGTTCCAACAAGCACTGAATTTGAACTTTCAAAAGCTTACTTCCCTTTCTACATTCGACGTCTCTTTTAATTCTTTGACGGGAGACCTCCCTCAGACTATGAATTCACTTTCAAGCATATCCACCATGAATCTACAAAACAACCAATTTACAGGAACCATTGATATCCTTGCTGATCTGCCTCTTGATAACCTGAATATAGAAAACAACCATTTCACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGAATGGTAATTCATGGAGCTCGGGACCTGCACCCCCACCTCCTCCTGGTACACCTCCAGTAGCAAAAAACAACGGTAATCGCAAGTCTGGTGGACATAGAACCTCGTCAGATTCTGGCTCAAGTGATGATGGAAGCAAAAAATCTGGTATAGGAGGTGGTGCCATTGCTGGAATAGTGATCTCTATCTTAGTTGTTGGTGCAATAGTAGCATTCTTTCTGGTGAAGAAAAGATCCAAGAAGTCGTTTGGAGATGTGGAAAAGCTAGACAATCAACCCTTGGCTCCACTTACTTCAAATGAAGTGCATGGAATGAATTCAACGCAAACTCCTTCTGTAATTGACTTAAAGACATTTGATACTTCAGCGGCCCCAATAAGTCTTAAGCCCCCTCCTTTTGATCGTAATAAATCATTTGATGAAGATGAGTTTCCAAAGAAGCCCATCGTAGTCAAGAAGACTGTAGCACCTCCTGCAAATTTGAAATCATATTCAATAGCTGACCTACAGATTGCTACTGGAAGCTTCAGTGTGGATCACCTTCTCGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGACAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCAATAATTTGTCGGATGATTTTATGGAAATAGTTTCGAACCTCGCCCGTTTGCATCATCCGAATGTGACGGAGCTTATAGGTTATTGTTCAGAGCATGGACAACACCTTTTAGTCTATGAGTTTCACAAAAATGGATCACTGCATGATTTTCTTCACCTCCCTGATGACTACATTAAACCATTGATATGGAATTCACGTGTCAAGGTTGCTTTGGGAATTGCACGCGCTTTAGAGTACTTACATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATAAAGGCAGCCAACATATTGCTTGATGCTGATCTAAATCCTCATCTTTCAGACAGTGGATTGGCCAGCTATATTCCTAATGCAAACCAGGTATTGAACAATAATGCTGGATCTGGATACGACGCTCCAGAGGTCGGATTGACTGGTCAGTATACTCTTAAGAGTGATGTATATAGCTTTGGAGTTGTCATGTTGGAGCTTCTAAGTGGAAGGAAACCATTTGATAGCTCAAGGTCAAGGTTTGAGCAGTCATTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGAATGTACCCTGTCAAGTCTCTTTCTCGATTCGCCGATGTCGTTGCTCTTTGTGTTCAGTCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTAGTTCGGTTAGTGCAGCGAACCAACATGAGCAAACGGACATTTGGAACCGATCAAGGAGGATCCAACCGAGGGGGTGATGACCAAGATTCCCTAGACATGTAA 2148 0.425 MSVDPWLMLMLMFISSCTYVINGDTDPSDVSALMALFQSMNSPPQLNWPANGNDPCGQSWTGITCSGNRITEIKLPGHQLTGTLGFQLQSLSSVTNLDLSNNNLAGNLPYQFPPNLQRLNLANNNFNGGIPYSFSDTPSLISLNLGHNQFQQALNLNFQKLTSLSTFDVSFNSLTGDLPQTMNSLSSISTMNLQNNQFTGTIDILADLPLDNLNIENNHFTGWIPEQLKNINLQKNGNSWSSGPAPPPPPGTPPVAKNNGNRKSGGHRTSSDSGSSDDGSKKSGIGGGAIAGIVISILVVGAIVAFFLVKKRSKKSFGDVEKLDNQPLAPLTSNEVHGMNSTQTPSVIDLKTFDTSAAPISLKPPPFDRNKSFDEDEFPKKPIVVKKTVAPPANLKSYSIADLQIATGSFSVDHLLGEGSFGRVYRAQFDDGQVLAVKKIDSSVLPNNLSDDFMEIVSNLARLHHPNVTELIGYCSEHGQHLLVYEFHKNGSLHDFLHLPDDYIKPLIWNSRVKVALGIARALEYLHEVCSPSVVHKNIKAANILLDADLNPHLSDSGLASYIPNANQVLNNNAGSGYDAPEVGLTGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGMYPVKSLSRFADVVALCVQSEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDSLDM* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0924 715 Gene3D Ribonuclease Inhibitor 26 250 IPR032675 -
Mal5g0924 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 15 712 - -
Mal5g0924 715 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Mal5g0924 715 Gene3D Transferase(Phosphotransferase) domain 1 489 703 - -
Mal5g0924 715 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
Mal5g0924 715 CDD STKc_IRAK 416 685 - -
Mal5g0924 715 PANTHER OS01G0253100 PROTEIN 15 712 IPR045271 GO:0004714|GO:0006468
Mal5g0924 715 MobiDBLite consensus disorder prediction 693 715 - -
Mal5g0924 715 MobiDBLite consensus disorder prediction 234 282 - -
Mal5g0924 715 Pfam Protein tyrosine and serine/threonine kinase 412 682 IPR001245 GO:0004672|GO:0006468
Mal5g0924 715 Gene3D Phosphorylase Kinase; domain 1 378 487 - -
Mal5g0924 715 MobiDBLite consensus disorder prediction 693 707 - -
Mal5g0924 715 MobiDBLite consensus disorder prediction 257 280 - -
Mal5g0924 715 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0924 715 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Mal5g0924 715 SUPERFAMILY L domain-like 25 230 - -
Mal5g0924 715 SUPERFAMILY Protein kinase-like (PK-like) 392 682 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0924 Mal-Chr5 15936304 15942488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0924 6 707 Strubbelig Receptor Gene Family AT1G53730 65.919 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mal5g0924 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0924 - - gmx:100780323 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0924 5 15936304 15942488 Mal5g0924 5 15936304 15942488 ECH