Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0918 ATGACAACAACAACCATTCTCAAATTCCTCACAATAATTGCTCTTATGGCTAATTCATTTCAAGAAAACATAATCAAGACTCTGAATAAACTCTTCAACAATTATTTCTATGTTGGTGATTCAATGAAGGAAATAGATCAAGTTGAAAGTGATTGTTGTTCAGTTTGTTTAAGCCAAATGTGTAAAGGTGAGAAAGTTAGGATATTACCTTTATGTAACCATAGATATCATTCTGATTGTATTGGTGCTTGGTTGAAGAACAATACTACATGTCCTCTTTGTAGGAGCAAAATCAATGACCATAGTATTAATCAGAATCTACAAAAACAGGTGAAACCCTTTGGAGAATGTTTGGTTGACCTTATACAAAGTTTCTCTGATGTACTTGTAGCTATTCTTTATATGATTCTTCCATCTAGTATCACTGAGAGTTTTCCAGTGGTTCATTGA 450 0.3267 MTTTTILKFLTIIALMANSFQENIIKTLNKLFNNYFYVGDSMKEIDQVESDCCSVCLSQMCKGEKVRILPLCNHRYHSDCIGAWLKNNTTCPLCRSKINDHSINQNLQKQVKPFGECLVDLIQSFSDVLVAILYMILPSSITESFPVVH* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0918 149 SUPERFAMILY RING/U-box 41 101 - -
Mal5g0918 149 PANTHER RING-H2 FINGER PROTEIN ATL2 47 106 - -
Mal5g0918 149 SMART ring_2 53 94 IPR001841 -
Mal5g0918 149 CDD RING-H2_PA-TM-RING 52 95 - -
Mal5g0918 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 101 IPR013083 -
Mal5g0918 149 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 47 106 IPR044675 -
Mal5g0918 149 Pfam Ring finger domain 52 95 IPR001841 -
Mal5g0918 149 ProSiteProfiles Zinc finger RING-type profile. 53 95 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0918 Mal-Chr5 15867604 15868053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0918 53 106 Carbohydrate Esterase AT3G14320 41.791 2.74e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0918 - - cam:101495833 203.371