Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0917 ATGGGTGCAACTGCAGCAGCTGCAACAACAGGGTCAAATGATGCAATAGGTGATTCTGGTACAATTGAAATAACAGGAAAAATCATGGTGATAGCTATAATTTTTCTATTTATGGTTGTTATGTTTGTTCTAATGCTTCATTTATATGCTAAGTGGTTTTGGTGGCGTTTTGAGGAAAGAACCGTTCCTCAAGCAAGAAACCGCCGTCGTCGACGGCGGTTTGTTTTTGCTCCTGGTCAAGATCCTGTTGTTTATGGAAGTCATCAAATTGGACTTGAAGCTAAAATTCTTAAGTCTTTGCCTGTTTTGGTTTTCAAAAGTGAAGATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTTTGTGATGTTGTTGAAGGAGAAAAAACTAGACTTTTACCAAAATGTAATCATGGGTTTCATTTAGATTGTATTGATATGTGGTTTCAATCTCATTCTACTTGTCCTCTTTGTAGGAATTTAGTTTCTGTTGAATCATGTAAACCAAATAGTACTACTTCAAATGGTGAAGAGATGAATGTGTTAGTGTCATCAGAAGGTGAAAATCTGAGTCATGTGAATGGTTTAGAGTCTTCAAATTTTCCAACAAATGTGCTTGTTTGGGGGAATAACCAAACACAAGTTAGTTCTTGTGGTGTTTCTTTGGAAGAAGGAAGTTCTCATCAACAACCTTGTTCAACATCATCATCATCATCTACTTTAGGTAGTGATAATGTTGATAGTAATAGATGTAATGGTAATGGTAATGGAATGTTGGTAATTGATATACCAATACCAAGTGAGTTTAGTTCTTCCTCTTTGTCATCTTCTGATAGTAGATGTGTTGAAGATGAAATGAAATCACCAATGGTAACAAGATTGAGGTCATTTAAGAGGCTTTTAAGTAGAGACAAAAAGTTAAGTCCTTCAAGTCCAAATTCTATGGATGTGGAACAAGGCCAGAGCTAA 966 0.3582 MGATAAAATTGSNDAIGDSGTIEITGKIMVIAIIFLFMVVMFVLMLHLYAKWFWWRFEERTVPQARNRRRRRRFVFAPGQDPVVYGSHQIGLEAKILKSLPVLVFKSEDFKDGLECAVCLCDVVEGEKTRLLPKCNHGFHLDCIDMWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGENLSHVNGLESSNFPTNVLVWGNNQTQVSSCGVSLEEGSSHQQPCSTSSSSSTLGSDNVDSNRCNGNGNGMLVIDIPIPSEFSSSSLSSSDSRCVEDEMKSPMVTRLRSFKRLLSRDKKLSPSSPNSMDVEQGQS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0917 321 CDD RING-H2_EL5_like 115 158 - -
Mal5g0917 321 PANTHER RING-H2 FINGER PROTEIN ATL3 11 318 - -
Mal5g0917 321 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 318 IPR044675 -
Mal5g0917 321 MobiDBLite consensus disorder prediction 298 321 - -
Mal5g0917 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 162 IPR013083 -
Mal5g0917 321 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Mal5g0917 321 MobiDBLite consensus disorder prediction 305 321 - -
Mal5g0917 321 SUPERFAMILY RING/U-box 96 163 - -
Mal5g0917 321 MobiDBLite consensus disorder prediction 225 248 - -
Mal5g0917 321 Pfam Ring finger domain 115 158 IPR001841 -
Mal5g0917 321 SMART ring_2 116 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0917 Mal-Chr5 15849273 15850238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0917 23 304 C3H Transcription Factor Family AT1G53820 43.631 3.41e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0917 - - cam:101491184 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0917 5 15849273 15850238 Mal5g0917 5 15849273 15850238 ECH