Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0910 ATGGATACTATGAAATCCTTCAAAGGTTACGGCAAAGTAGATGAAATAGAACAACAAGCCTTCAAAAAAAAGACACGTAAACGCATCACAATCATAATCATCTCCACCATCATTCTAGTAGCAGTGATCATAGCTGCAGTTGCAGGAATCCTCATACACAAGCACAACACCTCATCATCTTCCTCACCAAACTCACTTCCAAACACCCAATTAACACCCGCCACGTCACTCAAAGCAGTTTGTGACATAACTCAATACCCTAACTCCTGCTTCTCTTCCATCTCTTCTCTTCCTGAGTCCAACACCACTGATCCTGAACAACTCTTCAAACTATCTCTCAAAGTCTCCATTGATGAACTCTCCAAGCTTTCTCTGACGCGCTTCAGTGAAAAAGTTACTGAAGCGCGTCTTAAGAAAGCTATTGGAGTTTGTGGTAATGTTCTTGGTGATTCATTGGATAGGTTGAATGACTCAATGTCGGAGATTGTTGGTGCTGGGAAGATGCTTTCTCCGGTGAAGATTCGAGATGTGGAGACATGGCTGAGTGCGGCGTTAACGGATCATGAAACGTGTTTGGATGCTGTTGGTGAAGTTAACACCACCGCGGCGCGTGGTGTTATACCGGAAATAGAGAACATTTTGAGAAACTCGACGGAGTTTGCCAGTAATAGTTTGGCCATTGTGACCAAGGTCATAAGATTGTTGTCCAATTTTGAAGTACCGAATCATCACCGGAGGTTGCTTGGAGATTTTCCGGAGTGGTTGGGATCGGCGGAGAGGAGGCTGCTTGCGGCGGAGATGAATGATACGACGACACCAGATGCGGTGGTGGCGAAGGATGGGAGTGGACAGTATAGGACTATAGGGGAGGCATTGAATTTGGTGAAGAAGAAAAGTCTGACGAGATTTGTGGTGTATGTGAAGAAAGGGGTGTATGTAGAGAATATTGATTTGGATAAGAATACATGGAATGTGATGATTTATGGTGATGGTATGACGGAAACCATCGTATCCGGTGGCCGGAATTTCATGGACGGCACACCTACCTTTGAAACTGCCACTTTCGCTGTTAAAGGCAAGGGATTCATTGCCAAAGACATACAATTCTTGAACACTGCAGGTGCATCTAAGCACCAAGCTGTGGCAATGCGATCCGGCTCGGATCAATCCGTGTTCTATAAGTGTTCATTTGTTGGATTTCAGGATACTCTTTATGCACATTCAAATCGTCAATTCTACCGCGACTGTGACATTACAGGTACCATAGATTTCATATTCGGAAACGCAGCTGCTGTGTTCCAAAACTGCAAAATCATGCCTAGACAGCCACTATCAAATCAGTTCAACACAATCACTGCTCAGGGTAAAAAGGATCCTAATCAAAACTCTGGAATTGTGATCCAGAAATCAACTTTCACTACACTACCTGGTGACAATCTCATAGCACCTACTTACCTTGGTAGACCATGGAAAGATTTCTCCACCACTGTTATCATGAAATCAGATATTGGTCCATTCTTGAAACCAATAGGGTGGATGAGTTGGGTTGCTAATGTGGAGCCTCCAAGTACCATCCTCTATGCTGAATACCAGAATACTGGGCCAGGCGCAGACGTAACCCAGCGGGTCAAATGGACCGGTTATAAGCCCGCTCTCGGAGACGAAGAAGCTCTGAAGTTCACTGTTGATTCCTTTATCCAAGGTCCAGAGTGGTTGCCAAGTGCTGCTGTGCAGTTTGATTCTACCTTGTGA 1752 0.4475 MDTMKSFKGYGKVDEIEQQAFKKKTRKRITIIIISTIILVAVIIAAVAGILIHKHNTSSSSSPNSLPNTQLTPATSLKAVCDITQYPNSCFSSISSLPESNTTDPEQLFKLSLKVSIDELSKLSLTRFSEKVTEARLKKAIGVCGNVLGDSLDRLNDSMSEIVGAGKMLSPVKIRDVETWLSAALTDHETCLDAVGEVNTTAARGVIPEIENILRNSTEFASNSLAIVTKVIRLLSNFEVPNHHRRLLGDFPEWLGSAERRLLAAEMNDTTTPDAVVAKDGSGQYRTIGEALNLVKKKSLTRFVVYVKKGVYVENIDLDKNTWNVMIYGDGMTETIVSGGRNFMDGTPTFETATFAVKGKGFIAKDIQFLNTAGASKHQAVAMRSGSDQSVFYKCSFVGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPLSNQFNTITAQGKKDPNQNSGIVIQKSTFTTLPGDNLIAPTYLGRPWKDFSTTVIMKSDIGPFLKPIGWMSWVANVEPPSTILYAEYQNTGPGADVTQRVKWTGYKPALGDEEALKFTVDSFIQGPEWLPSAAVQFDSTL* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0910 583 SMART PMEI_2 72 227 IPR006501 GO:0004857
Mal5g0910 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
Mal5g0910 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Mal5g0910 583 Pfam Pectinesterase 274 568 IPR000070 GO:0030599|GO:0042545
Mal5g0910 583 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Mal5g0910 583 Pfam Plant invertase/pectin methylesterase inhibitor 77 227 IPR006501 GO:0004857
Mal5g0910 583 PANTHER PECTINESTERASE 1-RELATED 8 580 - -
Mal5g0910 583 SUPERFAMILY Pectin lyase-like 272 581 IPR011050 -
Mal5g0910 583 CDD PMEI-like_3 79 230 - -
Mal5g0910 583 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Mal5g0910 583 PANTHER PECTINESTERASE 8 580 - -
Mal5g0910 583 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 227 IPR006501 GO:0004857
Mal5g0910 583 Gene3D - 268 583 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0910 Mal-Chr5 15763040 15766137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0910 1 577 Carbohydrate Esterase AT1G53840 58.685 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0910 - - gmx:100784642 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0910 5 15763040 15766137 Mal5g0910 5 15763040 15766137 ECH