Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0895 ATGTTGCAGTTTCATCCTCATGGAGCTTCTAAACAAACTTGTACTCTTCTCGCTGTTACCTCTGAAACACGTTCCGTTGAACAGAAGCAGTTACAGGATCAACACAAATATCCTTTTCCTGAGTTGGTTTCTTCGGGGCGTCTCGAGGTTCAAACTCTTTGCAATCCGGAAAAGGAACAGTTTCGTAAAGCTCTTGAATCGTGTAAGCCAAATTTTGTTTACTTTCAAGGGGAGCAGTTACTGAATGAGGAAGTTGGTTCACTGGTTTGGCAAGGTGTGGAATTATCCAACCCTGAAGAGATATCAGAGCTCTTCGATACCACATTACCGACAGCTGTTTACTTAGAAATCCCAAATGGAGAAAGTTTTGCAGAGGCTCTTCATCTTAAGGGAATCCCGTATGTTGTATTTTGGAAAAATGCCTTTTCTCAATATGCTGCCTGCCATTTTCGTCAAGCATTATTTTCTGTGGTGCAGAGTTCATCTACACACACATGGGATGCTTTCCACCTTGCACATGCCTCTTTCGAACTTTACTGTGTTCAAAATAATCAAGTACTTCCTACTGATAGCAATGATGATGATAGCGATATGGGGCCACACCTTCTTGGCGAGTGTCTCAAAATCAACGTTGACCCTCCAGAGATGGATGAAGAAGATGATGATGAAGAAAGTTCCTCAGGCAGTCTTCCTTCTATACAGATACATGATGATGAAGTGAACTTGAGATTTCTCATCTGTGGTGCTCCTTCTACTGTTGATGAGTCATTGCTGAGATCTTTGGAGGACGGACTCAGAGCTCTCTTAACTATTGAAATACGCAGTTGCAAGCTCCACGGCAAGTATAGTGCCCCTCCACCACCTCTCCAGGCAGCTTCTTTTTCTCGTGGAGTTGTGACCATGCGATGTGATATATCAACTTGCAGTTCTGCACATATCTCACTTCTAGTATCTGGCAGTCCACAGGCCTGTTTTAATGATCAGCTCTTGGAGAATCATATAAAAAATGAGATAATTGAGAAGAGTCAACTAGTTCGTGCACAACTCAACAGTGAAGCAAACACACAGATTATCTCTGAACCTCGCAGATCTGCTTCAATAGCTTGCGGAGCAACTATATTTGAAGTTAGCATGAAGCTTCCTCAATGGGCTTTGCAGATTTTGCGACAGCTAGCACCTGATGTTTCTTATCGAAGTTTAGTTGCACTTGGCATTGCTAGTATTCAAGGGTTGCCTGTAGCTTCTTTTGAGAAAGATGATGCAGAGCGCTTACTTTTCTTCTATCAAAGCTCCGATAAAGATGGATATGAAAACGGAAATATAGTTTTCAGCAGGCTCCCCATTTGGTTGAAGCCTCCTCCTCCAACAAGAAAGAGGTCTGAATCAAGCCAAGGGGCTAGCCCTGACATCCAAGATGGTGTCTTTGCAGGGCACGGTGCTGTTAAAAATGTAGATGAAGAGGAAAAGGATAGGAAAATGGTGAATGGGATTAGCACACCGTTAACTCCAGCTAGGCAGAGATTAAAAGTATCAGCAATGAGGCCAATTCCTCATGTTCGACGCCATAGAATGACACCTTTTCGTGGACCTTCTGACGTAAATGGTTTTGGTGGTGCCCATGTTGAGGCTTATGTGCCACTTGTCCCTATGAAGCGTAGTAGTATTGGATCATCATCTGCAACACAGAGGAAATCTTTTTCAAACTCAGCTCAGTCTAAGCAGGTTATTTCATTGAATCCATTACCGTTGAAGAAACACGGCTGTAGTAGAGGCCCAGTACAGACTTGCTCTGAGGAGGAATTTATTAAAGATGTCATGGAGTTTTTGATTCTTCGAGGGCATAACCGACTGATTCCCCAAGGAGGGCTTTCTGAGTTCCCTGATGCCATTCTGAATGGAAAACGCCTTGATCTCTACAACTTATATAAAGAGGTGGTTACAAGGGGAGGATTTCATGTCGGCAATGGCATCAACTGGAAGGGACAAATATTTTCGAAGATGGGAAATTACACATCTACAAATAGAATGACTGGAGTTGGAAATACACTGAAGAGACATTATGAAACCTACCTTTTAGAATATGAATTAGCTCATGATGATGTGGATGGAGAATGCTGCTTGTTGTGTCACAGTAGTGCTGCTGGGGATTGGGTGAATTGCGGCATATGTGGTGAGTGGGCCCACTTTGGGTGTGACAGAAGGCAGGGTCTTGGCGCATTTAAGGATTATGCAAAAACAGATGGGCTGGAATATATATGTCCTCATTGTAGTGTTACAAATTTCAAGAAAAAACAAAGTGTTGCTAATGGGTATTCTCAAGGGTCAATGTTATCACGACCCCTTTGA 2346 0.4284 MLQFHPHGASKQTCTLLAVTSETRSVEQKQLQDQHKYPFPELVSSGRLEVQTLCNPEKEQFRKALESCKPNFVYFQGEQLLNEEVGSLVWQGVELSNPEEISELFDTTLPTAVYLEIPNGESFAEALHLKGIPYVVFWKNAFSQYAACHFRQALFSVVQSSSTHTWDAFHLAHASFELYCVQNNQVLPTDSNDDDSDMGPHLLGECLKINVDPPEMDEEDDDEESSSGSLPSIQIHDDEVNLRFLICGAPSTVDESLLRSLEDGLRALLTIEIRSCKLHGKYSAPPPPLQAASFSRGVVTMRCDISTCSSAHISLLVSGSPQACFNDQLLENHIKNEIIEKSQLVRAQLNSEANTQIISEPRRSASIACGATIFEVSMKLPQWALQILRQLAPDVSYRSLVALGIASIQGLPVASFEKDDAERLLFFYQSSDKDGYENGNIVFSRLPIWLKPPPPTRKRSESSQGASPDIQDGVFAGHGAVKNVDEEEKDRKMVNGISTPLTPARQRLKVSAMRPIPHVRRHRMTPFRGPSDVNGFGGAHVEAYVPLVPMKRSSIGSSSATQRKSFSNSAQSKQVISLNPLPLKKHGCSRGPVQTCSEEEFIKDVMEFLILRGHNRLIPQGGLSEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMGNYTSTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKQSVANGYSQGSMLSRPL* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0895 781 Pfam ARID/BRIGHT DNA binding domain 598 695 IPR001606 GO:0003677
Mal5g0895 781 SUPERFAMILY FYVE/PHD zinc finger 691 759 IPR011011 -
Mal5g0895 781 MobiDBLite consensus disorder prediction 212 232 - -
Mal5g0895 781 CDD ARID 597 695 - -
Mal5g0895 781 ProSiteProfiles ARID domain profile. 595 699 IPR001606 GO:0003677
Mal5g0895 781 SUPERFAMILY ARID-like 595 710 IPR036431 GO:0003677
Mal5g0895 781 MobiDBLite consensus disorder prediction 453 474 - -
Mal5g0895 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 699 762 IPR013083 -
Mal5g0895 781 Gene3D - 592 698 IPR036431 GO:0003677
Mal5g0895 781 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 771 - -
Mal5g0895 781 SMART ARID_2 592 695 - -
Mal5g0895 781 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 771 IPR042293 -
Mal5g0895 781 CDD PHD_ARID4_like 705 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0895 Mal-Chr5 15622884 15631344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0895 4 770 ARID Transcription Factor Family AT3G43240 60.465 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal5g0895 ARID 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0895 - - cam:101514085 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0895 5 15622884 15631344 Mal5g0895 5 15622884 15631344 ECH