Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0879 ATGTGTGGTGGAGCAATCATCTCCGACTTCATTCCAGCTGCGGCGGCGATAGGTGGTTCCCGCCGTGTCACGGCGGACATCTTATGGCCGAATTTGAGGAAACCCAGTTCAAGGAATTCAAGGAAACCGTTTTTGCTTGACGATGATTTTGAGGCTGGGTTCAGAGAGTTTAAGGATGATTCTGATTTCGATGAAGACGAGGATGAAGATGATGATGAAGGGTTGTTGGTTGGTGTCAAAGGTTTCACCTTTGGTTCCAATAACAACAAAGCTTCTAAGTCCTTTGTTCGTGGATCAAGTGCTGCAAAATCTGTTGCAGTGAAATCAAACGAGCAAGCTGAAAAGGAATCGAAGAGAAAGAGGAAGAATCAATATAGGGGTATCCGTCAACGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCAAGGAAAGGTGTTCGTGTTTGGCTCGGAACATTCAATACTGCTGAAGAAGCTGCAAGAGCTTATGATGATGCAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCAGAAGAGGCTCCAATTGCTTCCTCAAAACGTCTTAAGACAAATCCTGAGACACAGCTGTTGAATAAAAATCTGAACTCTTTCAAGCCGAATGGAAACCAAATGTTCAATTTCGGCGAAAATATGGAGAACTTCTATTCTCCTTTGGATCAGGTGGAACAGAAACCATTGGTTAACAACCAATATGCTGACATCGGAGCCTTCACCGGAAATGGAGTTCAGCTTGCATCTGCTGATGTTACAGCTTATTTCAGCTCGGAGCATTCAAGCAATTCATTTGATTATTCTGATTTATGCTGGGGAGAACAAGGCCCGAAAACACCTGAGATTTCATCCGTGTTTTCTGCTGTTGCTGCTGCTCCCGTGGAAGGTGAATCTCAGATGAACATGCAGTCTAACAACTCTCAGCCTATGCAAGAGGAATCTGCAAAGACACTCTCTGAGGAGCTCGCAGATATCGAATCCCAGCTGAAGTTCTTTGACAACTCCTTTGATGATAGCTGGAGTGATGCTTCATTGGCGGCTTTGCTCGGTGCTGATGCAACTCAGGATGGTGGAAACACAATGAACCTCTGGAGCTTTGATGACATGCCTTCCGTCGCAGGCGGAGTTTTCTGA 1158 0.4577 MCGGAIISDFIPAAAAIGGSRRVTADILWPNLRKPSSRNSRKPFLLDDDFEAGFREFKDDSDFDEDEDEDDDEGLLVGVKGFTFGSNNNKASKSFVRGSSAAKSVAVKSNEQAEKESKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDDAARRIRGKKAKVNFPEEAPIASSKRLKTNPETQLLNKNLNSFKPNGNQMFNFGENMENFYSPLDQVEQKPLVNNQYADIGAFTGNGVQLASADVTAYFSSEHSSNSFDYSDLCWGEQGPKTPEISSVFSAVAAAPVEGESQMNMQSNNSQPMQEESAKTLSEELADIESQLKFFDNSFDDSWSDASLAALLGADATQDGGNTMNLWSFDDMPSVAGGVF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0879 385 CDD AP2 124 182 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 PANTHER EREBP TRANSCRIPTION FACTOR 1 379 - -
Mal5g0879 385 MobiDBLite consensus disorder prediction 107 127 - -
Mal5g0879 385 Pfam AP2 domain 124 173 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Mal5g0879 385 Coils Coil 323 343 - -
Mal5g0879 385 PANTHER DNA-BINDING DOMAIN 1 379 IPR044808 GO:0003700|GO:0009873
Mal5g0879 385 Gene3D AP2/ERF domain 123 182 IPR036955 GO:0003700|GO:0006355
Mal5g0879 385 SUPERFAMILY DNA-binding domain 124 182 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0879 Mal-Chr5 15211466 15214246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0879 1 385 AP2-EREBP Transcription Factor Family AT3G14230 44.417 2.27e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal5g0879 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0879 K09286 - gmx:100818646 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0879 5 15211466 15214246 Mal5g0879 5 15211466 15214246 ECH