Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0869 ATGGAAGATTTCATTATCTCACCTTCTTCATCTTCCTCTATGATATCACTTCCTCATGAAAACCCTTCACCACAAACACCAACCCTTCAACAAAAGCTTCAATTTCTACTCCAAACCCAAACCGAAAATTGGGTCTATGCCATTTTATGGCAAACAACAAAAGATGAAAAAGGTAACCCTCTCTTATCTTGGGGTGAAGGCCATTTCGAAGGAACCAAAGAAACAACAACCTCAACAAAACAAAACGACACTAACACATGTACAAACGGTGATGCTGAATGGTTCTACGTGATGTCGTTGACTCGAAAATTTTCAATAGGTAATTCTTCTTCAATTTCTTTACCTGGTAAAGCTTTTGCTTTAGATTCTGTTCTTTGGTTGAATAGTAAACATGAACTTCAAATCTATAACTGTGAAAGATCCAATGAAGCACACGTGCATGGAATTGAAACGTTGATTTGTATTCCGACAACTAACGGTGTAATCGAAATGGGTTCTTATGACAATATCCAACAAAATTGGAACCTAGTACACCAAGCTAAGTCCATGTTCCAAACATCCTCATCAGAATCAAACTCAACATTAGATCTTATATCCACCAAACCACTTGACAAAATCCAAACAATTGACCAAACCATCTCATTCGCCAACATCGGTATCATCTCCGGCGCTGGAGAAGAAACCGATGAGAAGCAAAAAAAATTGCAACAAAAACATAATAATGCTTCATCATGTTCTGTTGATTCTGAAAATTCTGATTCAGAATATTGTCCACTATTAGCAACAAAAACAACAACAACAACAACAAAGAATGATTCTTTTGAGAAAAGAGAACCGAAGAAGAGAGGAAGAAAACCATTAACAGGAACACAAACACCGATGAACCATGTGGAAGCAGAGAGACAAAGGAGAGAGAAATTGAACCATAGATTCTATGCTTTAAGAGCTGTGGTTCCAAATGTTTCAAAGATGGATAAAGCTTCTTTGTTATCAGATGCAGTGGATTACATTAATGAGTTAAAAGCAAAGATTGGAGATTTAGAATCAGAGAAAAAAAAGGAAACAAAAAAAGTGAAGATGGAAACAACTGAAATTGTGGATAATCAAAGTACAACTTCAACAGTGGTGGATCAAAAAAGACCTAGTAATAATAATAATAATGGTATTGCTTTGGAGATTGAAGTGAAGATTATAGGAAGTGATGCTATGGTAAGAGTTCAATCAGAGAATGTTAATCACCCTGGTGCAAGATTAATGAGTGTATTGAAGGATTTGGAGTTTCAGGTACATCATGCTAGTATATCGACTGTTAATGAAGTTATGGTTCAAGATGTTGTTGTTAAAGTTCCTAATGAGATGAAAAATGAAGAGAGTCTAATTAGATCTGCAATTCTCATGAAATTAGATCAGGAGTGA 1416 0.3559 MEDFIISPSSSSSMISLPHENPSPQTPTLQQKLQFLLQTQTENWVYAILWQTTKDEKGNPLLSWGEGHFEGTKETTTSTKQNDTNTCTNGDAEWFYVMSLTRKFSIGNSSSISLPGKAFALDSVLWLNSKHELQIYNCERSNEAHVHGIETLICIPTTNGVIEMGSYDNIQQNWNLVHQAKSMFQTSSSESNSTLDLISTKPLDKIQTIDQTISFANIGIISGAGEETDEKQKKLQQKHNNASSCSVDSENSDSEYCPLLATKTTTTTTKNDSFEKREPKKRGRKPLTGTQTPMNHVEAERQRREKLNHRFYALRAVVPNVSKMDKASLLSDAVDYINELKAKIGDLESEKKKETKKVKMETTEIVDNQSTTSTVVDQKRPSNNNNNGIALEIEVKIIGSDAMVRVQSENVNHPGARLMSVLKDLEFQVHHASISTVNEVMVQDVVVKVPNEMKNEESLIRSAILMKLDQE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0869 471 Coils Coil 330 357 - -
Mal5g0869 471 SMART finulus 297 346 IPR011598 GO:0046983
Mal5g0869 471 Pfam Helix-loop-helix DNA-binding domain 295 340 IPR011598 GO:0046983
Mal5g0869 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 291 353 IPR036638 GO:0046983
Mal5g0869 471 MobiDBLite consensus disorder prediction 267 303 - -
Mal5g0869 471 Gene3D - 288 357 IPR036638 GO:0046983
Mal5g0869 471 PANTHER TRANSCRIPTION FACTOR BHLH14 1 468 - -
Mal5g0869 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 291 340 IPR011598 GO:0046983
Mal5g0869 471 PANTHER MYC 1 468 IPR045084 GO:0003700|GO:0006355
Mal5g0869 471 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 29 184 IPR025610 -
Mal5g0869 471 MobiDBLite consensus disorder prediction 1 27 - -
Mal5g0869 471 MobiDBLite consensus disorder prediction 229 253 - -
Mal5g0869 471 MobiDBLite consensus disorder prediction 238 253 - -
Mal5g0869 471 MobiDBLite consensus disorder prediction 270 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0869 Mal-Chr5 14860697 14862112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0869 1 459 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.916 1.99e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g0869 bHLH-MYC_N 1.3e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0869 - K13422 gmx:100795733 494.197