Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0860 ATGGGGAAGAAAGGAAGTAGTTCATGGTTAACTGCTGTGAAAAGAGCATTCAGATCTCCAACAAAAGATAGTGACAAAAGAAGTGGTAGAAGAAGAGAAGATTGTGATCAAGAAGAAGATGAAGAAAAGAAGAGAGAAAAAAGAAGGTGGATTTTTAGGAAACAGGTGAATCATGAAACAGTGAACAATACTCAACAAAGTACACCAACAAAATTGAAGCATGATGTGGTTACTGCTACAAGTGTGGTTTCAAGGACAGATCAAGATGAAAAGCATGCTCTTGCTGTTGCTATGGCTACAGCTGAGGCAGCAAGAGCTACTGCTCAAGCTGCTGTGGAAGTTGCAAGGTTGACTAAGTCTTCAAATCATGCTAGGGAGCATTATGCTGCTGTTGTGATTCAAACTTCTTTCAGAGGTTATTTGGCAAGAAGAGCACTTCGTGCACTTAAGGGGTTGGTGAAGTTGCAAGCATTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTACAAGCAAGAGTTCTGGACCAAAGGATAAGGTCTACTTCACATGAAGGATCTAGAAAATCAACCTTCAGTGACACTGGTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCCGATAGGAAATCAATATCAAGAGAAGGAAGTAGTATTGCAGATGATTGGGATGATCGTCCACACACAGTTGAAGAAGTTAAGGCTATGTTGCAACAGAGGAAGGAAGCAGCTATGAAGAGGGAAAAGTCCTTGTCCCAAGCTTTTTCTCAACAGATTTGGAGAAATGGTAGGACATCATCAATTGGAAATGAAGATGAACTTGAAGAGAGACCAAAATGGCTAGATAGGTGGATGGCTACAAAACCATGGGAGAATAGGGGAAGAGCTTCAACTGATCAAAGAGACTCTATTAAGACTGTGGAAGTTGACACATCTCAACCTTATTCATATCTAGGAGCAAATTACAGAAGATCACATCCAAATTATCAATATAATCCACACCACCAACCTCAAAGACATTCCATTGCTTCACCACTCCATAGAACACACCAAAATGGTTCCATTCACAACCAATCCATCACTACACCGTCTCCGTCGAAATCAAGACCTATCCAAGTCAGGTCGTCGAGCCCTCGTTGTGTTCGAGAAGATAGAAGCTATCACCACACCTCTCAAACACCAAGCTTAAGGTCTAATTACCATTACAATGGGAACTTGTACCAAAATAATAGGGTAGGAACAAGTAATGGTAGTAGTAATAGTATTGCTTCTACTACTGCTTCGGCTACATTGCCGAATTACATGCAAGCAACCGAGTCTGCTAAGGCTCGTATTCGGTCACAGAGTGCACCGAGGCAAAGGCCGTCTACACCAGAGAGGGATAGAGCCGGATCGGTAAAGAAAAGGCTTTCTTTCCCTGCTCCTGATCCTTATAATGTAGGAGGAACTGGTTATGGAAATTATGGACATAGTTTAAGAAGTCCAAGCTTCAAGAGTGTGAATGTAGCAGCATCGCATTATGGTTTGGAGCAAAATTCCAACTACTCTTCTTGTTGTACCGAGAGCCTTGGCGGCGAGGTTTCACCGTCTTCAACCAGTGACCTTAGAAGGTGGTTGAGATGA 1659 0.4231 MGKKGSSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKQVNHETVNNTQQSTPTKLKHDVVTATSVVSRTDQDEKHALAVAMATAEAARATAQAAVEVARLTKSSNHAREHYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSTSHEGSRKSTFSDTGSVWDSRYLQDISDRKSISREGSSIADDWDDRPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDSIKTVEVDTSQPYSYLGANYRRSHPNYQYNPHHQPQRHSIASPLHRTHQNGSIHNQSITTPSPSKSRPIQVRSSSPRCVREDRSYHHTSQTPSLRSNYHYNGNLYQNNRVGTSNGSSNSIASTTASATLPNYMQATESAKARIRSQSAPRQRPSTPERDRAGSVKKRLSFPAPDPYNVGGTGYGNYGHSLRSPSFKSVNVAASHYGLEQNSNYSSCCTESLGGEVSPSSTSDLRRWLR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0860 552 MobiDBLite consensus disorder prediction 450 466 - -
Mal5g0860 552 Pfam Protein of unknown function (DUF4005) 389 498 IPR025064 -
Mal5g0860 552 MobiDBLite consensus disorder prediction 303 318 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 303 322 - -
Mal5g0860 552 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Mal5g0860 552 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 552 - -
Mal5g0860 552 PANTHER IQ-DOMAIN 5-RELATED 1 552 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 327 387 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 530 552 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 450 492 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 1 46 - -
Mal5g0860 552 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Mal5g0860 552 SMART iq_5 148 169 IPR000048 GO:0005515
Mal5g0860 552 SMART iq_5 125 147 IPR000048 GO:0005515
Mal5g0860 552 Gene3D - 124 178 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 18 46 - -
Mal5g0860 552 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Mal5g0860 552 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Mal5g0860 552 MobiDBLite consensus disorder prediction 327 436 - -
Mal5g0860 552 MobiDBLite consensus disorder prediction 403 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0860 Mal-Chr5 14613520 14616405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0860 1 552 IQD Protein Family AT1G01110 57.217 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0860 - - gmx:100786729 825.854