Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0854 ATGTTTATTTATAGGAAGTTAATTTTGGAGATGGATGACAATGAAGTTGATTTAGCTACACATACAGAAGAGTTCAATGAGCTAGAAAACAAGTCGGAGGAATGGATTCCACAGTGCGATGCTGAACTGAAACCTGTGATTGGTAAGGTCTTTGATACTTTACTAGAAGCGGGTGATTTTTATAAAAACTATGCACATGCTGTTGGTTTTAGTGTGCGTAATTCAACTGAAACAAAAGATACAAATGGTGTAGACGAGCATAAGTTGCTTATTAGTGAAGATAGTTTGCCTAAAGGTAGAAAAATAAAATTGACCCGGGAGGGATGTAATGCAAGAATTGTTTTCAGGAGAAATGATGAGGGTAAGTTTGAAGTCTCAAAATTTTATGAAGGTCATTCACACACACTTGTCACACCTAAAAAGAAACAGTTGTTAAGATCGGCAAGGAGTGTCAACAGTGTTCATAAGAATTTATTATTTGCTTGCAATAGAGCTAATGTGGGGACTTCAAAAGGTTATCAAATATTGAAGGAGCAGGTTGGGAGTTATGAAGATATAGGATGCACACAAAGAGACTTTCAAAATTTTTCAAGGAATATGAAAGAATTGATCAAAGATTCTGATGCAGATATGTTCATTGATAATTTTAAAAGAAAACATGAGATGAACAATTCTTTTTTCTATGATTATCAATCTGATAATGATGGGAAGTTGAAATATGTGTTTTGGGCCGATGGCATTTCTCGAAAAAAGTACTCTTTGTTTGGAGATGTAGTTTCATTTGATACTACATACAATACAAATAAGTATCATCAGGTTTTTGCACCATTCACTGGTGTAAATCATCATCGTCAAAGCATAACCTTTGGAGCTGCATTTTTAGCTGATCAAAAAGAAGATTCAATGTGGAGGCTTTTATTGGATCCTATGTACCTAAGAAAATTCAAATTCTTCCACCTGAACCGTCAAATACCAAAGGTTGTGGAAAACGGATAA 996 0.3454 MFIYRKLILEMDDNEVDLATHTEEFNELENKSEEWIPQCDAELKPVIGKVFDTLLEAGDFYKNYAHAVGFSVRNSTETKDTNGVDEHKLLISEDSLPKGRKIKLTREGCNARIVFRRNDEGKFEVSKFYEGHSHTLVTPKKKQLLRSARSVNSVHKNLLFACNRANVGTSKGYQILKEQVGSYEDIGCTQRDFQNFSRNMKELIKDSDADMFIDNFKRKHEMNNSFFYDYQSDNDGKLKYVFWADGISRKKYSLFGDVVSFDTTYNTNKYHQVFAPFTGVNHHRQSITFGAAFLADQKEDSMWRLLLDPMYLRKFKFFHLNRQIPKVVENG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0854 331 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 303 IPR031052 GO:0006355
Mal5g0854 331 Coils Coil 11 31 - -
Mal5g0854 331 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 25 303 - -
Mal5g0854 331 Pfam FAR1 DNA-binding domain 59 137 IPR004330 -
Mal5g0854 331 Pfam MULE transposase domain 258 308 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0854 Mal-Chr5 14400662 14401711 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g0854 FAR1 8.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0854 - - cqi:110709295 315.079