LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g0845	ATGGCTTCTAATATTTTTGTCAATTTGTTGATCCCTTGTATTACAATTCTTCACTTGATCTTCACATTGGCTCACTCTGATAATTATATTATTCATATGGATTTATCAGCTATGCCAAAAGCATTTTCAAATCAACAAAGTTGGTATGAATCCACCCTTTCACAAGTTACAACCAACAATAATTTCACTTCTTCTAAAATCATTTATACATACACCAATGTTATGAATGGTTTTAGTGCAAGTCTATCACCTGAAGAGCATGAAGCTCTTAAAACCTCCCCTGGTTACATTTCTTCAATACCTGATTTACCCTTGAAACTTCACACAACACACTCACCAAAATTCCTTGGCCTCAATCCCTTTAAAGGGGCATGGCCAGCTTCTAAGTTTGGTCAAGATGTCATTGTTGGTTTGATTGACACTGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAATGGAATGACTAAAATTCCTTCAAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAAAAATTCATCTTTTTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAATAAAGGGCTCTTGGCAAAAAACTCCAACATTAATACAACAATAGTGAACACCGCACGCGACACAGATGGTCATGGAACCCACACTTCAGCAATTGCAGCTGGAAATCAAGTTGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCAAGAGGAATAGCTACATTGTCTAGAGTAGCCATGTACAAGATTGTGTGGGGAGTAAATGCAGATCCGATTGCACTTTCATCTGATATAATGGCTGCAATTGATGCTGCAATATCAGATGGTGTTGATGTTCTTTCGATCTCATTGTCTCCAATTGACGATTTACCTTTATATGAAGATCCGATTGCAATAGCCTCTTTTGCAGCTATGGAAAAAGGTGTTTTTGTGTCTTGTTCAGCAGGTAATGAGGGCCCTCACTTTAAAACTCTTCGCAATGGAATACCATGGTTGACAACTGTTGCTGCTGGTACTATGGATCGTAAATTTCAGGCGAATCTTACACTTGGTAATGGAGTCTCACTCACAGGTCGGTCTAACTATCTAGGAAATTTCTCTGCTAGCAATTTGCCAATTGTTTTCATGGGTTTGTGTGACAATGTTACAAAATTAATCAAAGTGAAGAGCAATATTGTGGTTTGTGAAAATGGAGATACTCTTGAACAATATTCTAATATGTATCAAGCAAATGTTGTTGGAGCTGTTGTCATATCAAATTCATCAAATTTTGAATACTTTGAAAAACAAAAGTATAGTTTTCAAGATTTAAGTTATGCAAACATCTTTATTAATCCAATAGATGGAGAAATTGTCAAATCTTACATCAAGAGTAACTCTAAGTCAGCTCCAACAGCAAACATGTCTTTCAAGTTAACATCTTTTGGTACCAAACCAGCACCTATGGTTGATTCTTATAGTTCAAGAGGACCATCAAATAGTTGTCCATATGTGTTGAAACCTGACGTTACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCCACAAATATTCCTGTGTTGGATCCTGGGTCTGAAGTCTTCAACAAGTTCAAATTTTTAACAGGAACATCTATGGCGTCTCCTCATGTGGCCGGTGTAGCAGCAATTTTAAAAGGAGCACATGTTGATTGGAGCCCTGCAGCTATAAGGTCAGCAATTATGACAACATCAAACATATTTGATAATACTAAGGAACATATCAAAGACATAGGAACAGGTAACAAAGTTGCAACTCCTCTTGCATTAGGAGCTGGTTATGTTAATCCCAACAGAGCACTTGATCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAACCATCACTACCATTACAAGATCCTCTTCCAATGATTGCTCTAAATCTTCCTTGGATCTTAACTACCCTTCTTTTATAGCTTTCTTCAATGCTGAAAATTCTTCTTCAGGGACCACCCAAGAATTTCACAGAACAGTTACCAATGTTGGTGAGGGACAAGCGATTTATGTTGCTTGCATTACGCGTGTGAAAGGGTACCGTATTAATGTTATCCCAAATAAGTTAGTGTTCAATAAGAAGGGTGAGAAGCTAAGCTACACATTGAGGATTGAAGACGCAAGAATAACACAAAAGAATGAAGTAGATTTTGGTTACCTCACTTGGGAAGATGGGAAGCATGTGGTAAGGAGCCCTATTGTTGTAAATCAAAATTTATAG	2283	0.3723	MASNIFVNLLIPCITILHLIFTLAHSDNYIIHMDLSAMPKAFSNQQSWYESTLSQVTTNNNFTSSKIIYTYTNVMNGFSASLSPEEHEALKTSPGYISSIPDLPLKLHTTHSPKFLGLNPFKGAWPASKFGQDVIVGLIDTGVWPESESFNDNGMTKIPSKWKGQLCQFENTKNSSFCNKKLIGARFFNKGLLAKNSNINTTIVNTARDTDGHGTHTSAIAAGNQVDGASFFGYANGTARGIATLSRVAMYKIVWGVNADPIALSSDIMAAIDAAISDGVDVLSISLSPIDDLPLYEDPIAIASFAAMEKGVFVSCSAGNEGPHFKTLRNGIPWLTTVAAGTMDRKFQANLTLGNGVSLTGRSNYLGNFSASNLPIVFMGLCDNVTKLIKVKSNIVVCENGDTLEQYSNMYQANVVGAVVISNSSNFEYFEKQKYSFQDLSYANIFINPIDGEIVKSYIKSNSKSAPTANMSFKLTSFGTKPAPMVDSYSSRGPSNSCPYVLKPDVTAPGTSILAAWPTNIPVLDPGSEVFNKFKFLTGTSMASPHVAGVAAILKGAHVDWSPAAIRSAIMTTSNIFDNTKEHIKDIGTGNKVATPLALGAGYVNPNRALDPGLVYDVGVQDYVNLLCALNFTQKTITTITRSSSNDCSKSSLDLNYPSFIAFFNAENSSSGTTQEFHRTVTNVGEGQAIYVACITRVKGYRINVIPNKLVFNKKGEKLSYTLRIEDARITQKNEVDFGYLTWEDGKHVVRSPIVVNQNL*	761

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g0845	760	Pfam	Fibronectin type-III domain	654	756	IPR041469	-
	Mal5g0845	760	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.9	20	756	-	-
	Mal5g0845	760	Gene3D	Peptidase S8/S53 domain	133	623	IPR036852	GO:0004252\|GO:0006508
	Mal5g0845	760	Gene3D	-	627	759	-	-
	Mal5g0845	760	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	108	IPR037045	-
	Mal5g0845	760	ProSiteProfiles	Serine proteases, subtilase domain profile.	115	610	-	-
	Mal5g0845	760	ProSitePatterns	Serine proteases, subtilase family, serine active site.	539	549	IPR023828	-
	Mal5g0845	760	Gene3D	-	344	479	-	-
	Mal5g0845	760	SUPERFAMILY	Subtilisin-like	107	614	IPR036852	GO:0004252\|GO:0006508
	Mal5g0845	760	CDD	Peptidases_S8_3	105	575	IPR034197	-
	Mal5g0845	760	PRINTS	Subtilisin serine protease family (S8) signature	131	150	IPR015500	-
	Mal5g0845	760	PRINTS	Subtilisin serine protease family (S8) signature	209	222	IPR015500	-
	Mal5g0845	760	PRINTS	Subtilisin serine protease family (S8) signature	538	554	IPR015500	-
	Mal5g0845	760	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	20	756	IPR045051	-
	Mal5g0845	760	Pfam	Peptidase inhibitor I9	29	108	IPR010259	-
	Mal5g0845	760	Pfam	Subtilase family	131	578	IPR000209	GO:0006508\|GO:0008236

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g0845	Mal-Chr5	14188765	14191047	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g0845	24	745	Subtilisin-like Serine Gene Family	AT5G67090	46.404	0.0	608

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g0845	-		-	gmx:100786751	944.495