Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0843 ATGTCGATCGGAGAAGTTGCTTGCAGCTACTCGCTTATGATCCTTCATGATGATAACATCGCCGTCACTGGTGAGAAAATCTCAACTTTGTTGAAAGCTGCAAAGGTTGATGTTGAAGCTTACTGGCCAAGCTTATTCGCTAAACTTGCTGAGAAGCGAAACCTTGATGATTTGATCTTGAATGCCACTGGAGGTGGGGCTCCGGTTTCTGTTTCAGCCCCTGTTGCTGCTGCTGCCTCCACTGCCGTTGCTGCTCCTACCGAGGAGAAGGAAGAGCCCAAGGACGAGAGTGATGATGACATGGGATTCAGCTTGTTTGATTAG 324 0.4846 MSIGEVACSYSLMILHDDNIAVTGEKISTLLKAAKVDVEAYWPSLFAKLAEKRNLDDLILNATGGGAPVSVSAPVAAAASTAVAAPTEEKEEPKDESDDDMGFSLFD* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0843 107 CDD Ribosomal_P1 5 106 - -
Mal5g0843 107 MobiDBLite consensus disorder prediction 87 101 - -
Mal5g0843 107 Gene3D - 1 62 IPR038716 -
Mal5g0843 107 Hamap 50S ribosomal protein L12 [rpl12]. 6 107 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mal5g0843 107 Pfam 60s Acidic ribosomal protein 22 106 - -
Mal5g0843 107 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 97 - -
Mal5g0843 107 MobiDBLite consensus disorder prediction 81 107 - -
Mal5g0843 107 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0843 Mal-Chr5 14147953 14149507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0843 1 107 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 53.509 1.71e-36 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0843 K02942 - mnt:21402570 129.413