Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0838 ATGGATGAAGAAATAATTGAATTAGAAAGAAAAATGAATGAAAGAGAGGAGAAGAAGGAGGATGGTGTATTTAGGTGGGAAATGTATTTACCAAGAAAAAATGTTGCTGTTCTGCTTGTTGAATCTGATCGTGCTACTCGGAGGTTAATTACTTCACTTCTCAATAATTGCCATTACAAAGTTATTGCGGTTTCTAATGGATCAAAGGCATGGGAGACGATGAAGATGAAGGCAATTGACATTGATCTCGTATTAACAGAAATGGAGTTGCCTGCAATGTCTGGATTAGCACTTCTTTCTTTAATTATGGATCATGAAATTGGCAAAAACATTCCCGTTATAATGATGTCTTCTCACGATTCACGTAGCACGGTAATGAAGTGCATGTGTAAAGGTGCAGCTGATTTTCTTATCAAACCTGTTCGGAAGAATGAGCTTACAAACTTATGGCAGCATGTATGGAGAAAGCATGTTATTAACAGGCCTCTCCAAAATACAACATCTGTACAAGATAATCTTAAAATTGCCACAGAAGACAATTTTGCTCGCAATCAATCGACTGATTCTGTTTCTGTGGCTTCCTCGCAGAAAAATAATGAATGCAGTGAGAAATTGAGTGAGTTTCAAAGCACATGTGCATTGCCATTTTCTGATGCTGAGAATGTATACATGGATAATATGCAAAAGCCCTGTCAGATGAAGAGTTGTTTGAAATTAAACAACATTGATGTGTTGAAGCATGAAGAGTCTAACAAAATTGAAAGGGGATCAACTAAGCATAATGATGAAACAGGAGATTCAAGGCTAGAACAAGACTGCGGTACTGCTGAAATTGAGTCCAAAAATGAAATATTTAGAGCTGAGTTAAGCAGAGAGAACCCTAATATGGATACCGAGACACGTGGATGCAGTGATGAACTGATAGAACCTTCTAGCAGAGCTATCGACTTGATTTCCACGTTTGGGAATCTCCATAAGCGCACCAAGGAAATCCATTGTATTAATGGTGATAAAGAAGCCAAGTTTGATTTTGAAAAAGAATTGCAGCTTTCTTTAAGAAGTGATTTTTCTGGCAGCTCATGCAAACAAGCAAGTGAAGCAACTGAGGAATGGCAAAGATTGAACCACTCAAATGCTTCTGCCTTTTCTCGGTATGATGGCAGTAAGATGTTGCGGCCAATTTTTCAAAACTCCAATTGGAATTCTAATAAATCTCACGAGCTATCTGTTGTTACTGGCTCATTTAAAATGGAAAATATGACTACAGCAGTCATGGCTCAGTATGAACAACTTGGACTCTTAGCTAGTAATGCTTTCCATCACATGTTGACTCCTAAATCAAATTGCCAAAAAGAGAGCTCTCCCTTTCCCTCAAGTTCCTCCTCCCAGTCCAATCCTGAAAGTCACAATTCAGAACATTGTCATAATTGCTCTTATGATGCTAACTACAGTTTCCTTGATCAAAGTGTTACTGAAAAAATTGATTTGGATCATGTGGTGCATGATTCTCCTACTGCTAGGCAGGGTTTTGGCAATGACTTTCACCGCTCTTCAAATCATAATAGTAGTGGCAATGATGGAAGGGTTACTGCAAATGTGGTTACTAAGAACTCAAGAAGTTCTAGAGATGGTAGGCGCTATAACTATAATAATTATGATTGTGATTATCATGATGATGATGATGAATTTAGATTGAGTGATTCTCATCGCTCCAGTCAAAGAGAAGCAGCCCTAACAAAGTTTCGATTAAAGCGAAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAGAGCCGGAAAAAACTGGCAGAGCAGCGCCTTCGGGTTAAAGGGCAGTTCGTACGCAAAGTACACAATGATGATCATCCAAATGTAGATGCTAGTAGTGGTGATCAATGA 1899 0.3849 MDEEIIELERKMNEREEKKEDGVFRWEMYLPRKNVAVLLVESDRATRRLITSLLNNCHYKVIAVSNGSKAWETMKMKAIDIDLVLTEMELPAMSGLALLSLIMDHEIGKNIPVIMMSSHDSRSTVMKCMCKGAADFLIKPVRKNELTNLWQHVWRKHVINRPLQNTTSVQDNLKIATEDNFARNQSTDSVSVASSQKNNECSEKLSEFQSTCALPFSDAENVYMDNMQKPCQMKSCLKLNNIDVLKHEESNKIERGSTKHNDETGDSRLEQDCGTAEIESKNEIFRAELSRENPNMDTETRGCSDELIEPSSRAIDLISTFGNLHKRTKEIHCINGDKEAKFDFEKELQLSLRSDFSGSSCKQASEATEEWQRLNHSNASAFSRYDGSKMLRPIFQNSNWNSNKSHELSVVTGSFKMENMTTAVMAQYEQLGLLASNAFHHMLTPKSNCQKESSPFPSSSSSQSNPESHNSEHCHNCSYDANYSFLDQSVTEKIDLDHVVHDSPTARQGFGNDFHRSSNHNSSGNDGRVTANVVTKNSRSSRDGRRYNYNNYDCDYHDDDDEFRLSDSHRSSQREAALTKFRLKRKERCFEKKVRYQSRKKLAEQRLRVKGQFVRKVHNDDHPNVDASSGDQ* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0838 632 MobiDBLite consensus disorder prediction 510 538 - -
Mal5g0838 632 MobiDBLite consensus disorder prediction 252 272 - -
Mal5g0838 632 SUPERFAMILY CheY-like 35 166 IPR011006 -
Mal5g0838 632 Coils Coil 1 21 - -
Mal5g0838 632 PANTHER PRR RESPONSE REGULATOR 15 236 - -
Mal5g0838 632 Gene3D - 36 260 - -
Mal5g0838 632 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Mal5g0838 632 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Mal5g0838 632 Pfam CCT motif 574 616 IPR010402 GO:0005515
Mal5g0838 632 SMART REC_2 35 150 IPR001789 GO:0000160
Mal5g0838 632 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 236 IPR045279 GO:0009736
Mal5g0838 632 PANTHER TWO-COMPONENT RESPONSE REGULATOR 239 627 IPR045279 GO:0009736
Mal5g0838 632 MobiDBLite consensus disorder prediction 446 473 - -
Mal5g0838 632 MobiDBLite consensus disorder prediction 506 546 - -
Mal5g0838 632 ProSiteProfiles CCT domain profile. 574 616 IPR010402 GO:0005515
Mal5g0838 632 PANTHER PRR RESPONSE REGULATOR 239 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0838 Mal-Chr5 14061235 14066366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0838 559 623 Response Regulator Gene Family AT5G24470 64.179 6.70e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mal5g0838 Response_reg 2.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0838 K12130 - gmx:100802674 567.385