Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0835 ATGGAGAGGCTTCAAGGACCCATCAATTCTTGTTTCTTTGGTGAAGTGAATTGTTTAGACCAAACATTACTTGATGAACAAAGTATAAGATTTGAAGAGGAAGAACAATTTCTCATATCAAGTTTAGAAGATAACATGCCATTTCTTCAAATGCTTCAAAGTGTTGAATCTTCTCCACAGTTTTTTCCTTTGAAAGAACCAAATTTTCAAACACTTTTAAGGCTTCAACATATGAAAAAACCATATGAAGATATAGCTTTTTTTCCTAGAATGGATTCACAACAAGTTCAAGCTGCAGCATTGGAATTTGAAAGCTGTGTCACACAAGAAATGTTGGAGATTCAATCACCAATGAAATCTGAAAACAATGAACTTCAACACAAACTTTCACCTTCATGCATTGAGAAATTAAGCTATGAATGTAACCAAGAACAAACAAAAACATCACAATCATGTTCCAAATCTCAACAAGGAACAACAAGGGAAAAGAGGAAGAGAAAAAGAACAAGACCAGTTAAGAATAAGGAAGATGTTGAGAATCAAAGAATGACACACATTGCTGTTGAACGCAATAGGAGACGCCAAATGAATGACCACCTTAGTGTTCTTAGGTCTCTTATGCCCTCTTCATATGTTCAAAGGGGTGACCAAGCATCAATAATTGGAGGAGCAATAGACTTTGTGAAAGAATTGGAACAATTGCTTGAATCTCTTGAAGCACAAAAAAGGATAAAAAAGAATGAAGATTTTGGTTCCTCATCATCATCATCACCACCTAGTTATGGAATGAAATTATCATCTTGTGAAGAAAATGAGGTGAAGGCAGAAAACAAATCAGATGCAGCAGATATAAAAGTGACATTGATTCAAACCCATGTGAACTTAAAAATTGAGTGCAAAAAAAGAGTTGGTCAATTGATAAAGGTTATTGTTGCATTGGAAAATCTTAGGCTAACTATTCTTCACCTTAACATCACATCCTTTGATTCTTCTGTACTCTACTCCCTCAATCTCAAGATTGAAGAAGACTGTAAGCTAAGCACAGCAAATGACATAGCAGAAGCAGTTCATCAAATATTCAGCTACATTAATGGTAGCTAA 1101 0.3479 MERLQGPINSCFFGEVNCLDQTLLDEQSIRFEEEEQFLISSLEDNMPFLQMLQSVESSPQFFPLKEPNFQTLLRLQHMKKPYEDIAFFPRMDSQQVQAAALEFESCVTQEMLEIQSPMKSENNELQHKLSPSCIEKLSYECNQEQTKTSQSCSKSQQGTTREKRKRKRTRPVKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPSSYVQRGDQASIIGGAIDFVKELEQLLESLEAQKRIKKNEDFGSSSSSSPPSYGMKLSSCEENEVKAENKSDAADIKVTLIQTHVNLKIECKKRVGQLIKVIVALENLRLTILHLNITSFDSSVLYSLNLKIEEDCKLSTANDIAEAVHQIFSYINGS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0835 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 248 IPR036638 GO:0046983
Mal5g0835 366 Gene3D - 171 248 IPR036638 GO:0046983
Mal5g0835 366 Coils Coil 228 248 - -
Mal5g0835 366 SMART finulus 186 237 IPR011598 GO:0046983
Mal5g0835 366 MobiDBLite consensus disorder prediction 250 264 - -
Mal5g0835 366 MobiDBLite consensus disorder prediction 246 265 - -
Mal5g0835 366 PANTHER TRANSCRIPTION FACTOR BHLH70 19 365 - -
Mal5g0835 366 PANTHER MAX DIMERIZATION, MAD 19 365 - -
Mal5g0835 366 Pfam Helix-loop-helix DNA-binding domain 181 232 IPR011598 GO:0046983
Mal5g0835 366 MobiDBLite consensus disorder prediction 145 177 - -
Mal5g0835 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 231 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0835 Mal-Chr5 14026281 14029459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0835 40 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 42.353 2.08e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g0835 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0835 - - gmx:100789928 541.962