Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0832 ATGTCTCCTTCTCTAGAAACCATTAATAGTGAAGCTAATCACCTCACACAAGGAGATGATGTCCAAAATGAAGAAGATGGCATAGTTTTTGCTTTGAACTTGATTTCTTCTATCATGCTTCCATTGACCGTTCGATCCGCAGTTGAGCTTGGCATCTTCGATATTTTAGCCAAAGCCGGGAAAGATGCCAAGCTCTCTGCAGAAGACATAGCGGTTGAGATTGGATCAAAGAACCAAGAAGCACCCACAATGTTGGATCGTCTTTTGAGATTGTTGGCTAGTCATTCCATGCTTCGTTGCTCGCTTTATGAAGATCAACAAGGGCTTACGTCTCCTCGAAGGCTCTATAGCCTCGCCCCCGCCGCTAAGTATTTTGTGACGGATGTTGACGGTGTGTCACTTGGACCAACCTTAAACTTACCTCTAGACAAAATTTTCTTGGGAAGCTGGACCGAAATGAAAGGAGCAATTTTGGAAGGAGGCATACCATTCAATAGGGTTTATGGTATGCATGCATTTGAATACCCAATTGTGGATCCAAGGTTCAATGATGTATTCAACAATGCTATGGTCAATTGCACAACTATAGTCATGAAGAGGGTTCTTGAGATCTATGAAGGTTTTGAGCACATCAATAAGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAAGCTAATTACTTCTAAATATCCTCATATACATGGTGTTAATTTTGACTTGCCACACGTCCTAGAACATGCACCTACCTATGAAGGTGTGACACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTGATGGAGATGTCATTTTCTTGAAGTGGATACTTCATGATTGGAGTGATGAACAATGTTTGAAGTTATTGAAGAATTGTCATAAAGCTATTCCTAATGATGGAAAAGTGATTGTTGTGGACTCAATTATTCCTGTTTTTCCCGAGAGTGCAAAGGTAGCCAAGATGGCTTTCCAAGCTGACCTCATGATGATGGCTCAAAATCCAGGAGGGAAAGAACGAACCAAAGATGAATTCATGAAATTGGCATTAGGATCTGGATTTAGTGGCATCAAATTTGCATGCTATTTCTCTGGCTTTTGGGTTATGGAATTCTTTAAGTAG 1122 0.4118 MSPSLETINSEANHLTQGDDVQNEEDGIVFALNLISSIMLPLTVRSAVELGIFDILAKAGKDAKLSAEDIAVEIGSKNQEAPTMLDRLLRLLASHSMLRCSLYEDQQGLTSPRRLYSLAPAAKYFVTDVDGVSLGPTLNLPLDKIFLGSWTEMKGAILEGGIPFNRVYGMHAFEYPIVDPRFNDVFNNAMVNCTTIVMKRVLEIYEGFEHINKLVDVGGGLGINLKLITSKYPHIHGVNFDLPHVLEHAPTYEGVTHVGGDMFESVPDGDVIFLKWILHDWSDEQCLKLLKNCHKAIPNDGKVIVVDSIIPVFPESAKVAKMAFQADLMMMAQNPGGKERTKDEFMKLALGSGFSGIKFACYFSGFWVMEFFK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0832 373 Pfam O-methyltransferase domain 150 355 IPR001077 GO:0008171
Mal5g0832 373 PANTHER O-METHYLTRANSFERASE 1 373 IPR016461 GO:0008168
Mal5g0832 373 SUPERFAMILY "Winged helix" DNA-binding domain 24 128 IPR036390 -
Mal5g0832 373 Gene3D - 39 201 IPR036388 -
Mal5g0832 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 373 IPR016461 GO:0008168
Mal5g0832 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 373 - -
Mal5g0832 373 PIRSF O-mtase 8 373 IPR016461 GO:0008168
Mal5g0832 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 371 IPR029063 -
Mal5g0832 373 Pfam Dimerisation domain 43 93 IPR012967 GO:0046983
Mal5g0832 373 Gene3D Vaccinia Virus protein VP39 183 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0832 Mal-Chr5 13945957 13948013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0832 16 373 Monolignol Biosynthesis Gene Families AT5G54160 50.975 1.50e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0832 K13066 - gmx:100789402 565.459