Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0811 ATGGCTAATGAAGGAAACAAAAGCAATGATTTCTATGCAGTTTTGGGATTGAATAAAGAATGCTCTGATTCAGAGCTAAGGAATGCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGAAATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTATTCTGTTTTATCTGACACAAATAAGAGGTTAATGTACGACGTTGGAGTTTACGACAGTGATGATGACGAAAATGGTATGGGAGACTTTCTAAACGAAATGGTTACAATGATGAGCCAAACAAAATCAAATGAAAATGGAGAGGAGAGCTTTGAAGAGTTGCAACAGTTATTTGATGATATGTTTCAAGCAGATATTGGATTAAATGGAAGCACTTCTCTTAATGCTTCTGGTTGTTCTACTTCATCTACTTTCATGACTTATAGTGAAAGTTCTAATTCAAATAAGCGAAATTCCACTCAAATGAATTATGGAAAGGCAGAGGATTCTTCTAGTTTTGGTGCCAATTACCAGAACTTCTGTTTTGGGATGAAGCACCTTCAAGAAGATGTGGAGAAGGAAAAAGGGGGAATTTTAGAAGGAGGTAGCAAAAGACAAAGAAGAGGAAGAAAGCACAAAATGTCATGTGGGCATGATGTTTCCTCTAATGACAATCCTGGAATTTCTGCTAATTGA 708 0.3672 MANEGNKSNDFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVLSDTNKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFDDMFQADIGLNGSTSLNASGCSTSSTFMTYSESSNSNKRNSTQMNYGKAEDSSSFGANYQNFCFGMKHLQEDVEKEKGGILEGGSKRQRRGRKHKMSCGHDVSSNDNPGISAN* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0811 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Mal5g0811 235 MobiDBLite consensus disorder prediction 197 235 - -
Mal5g0811 235 CDD DnaJ 10 70 IPR001623 -
Mal5g0811 235 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Mal5g0811 235 SMART dnaj_3 9 73 IPR001623 -
Mal5g0811 235 MobiDBLite consensus disorder prediction 152 172 - -
Mal5g0811 235 Gene3D DnaJ domain 7 136 IPR036869 -
Mal5g0811 235 PANTHER PUTATIVE, EXPRESSED-RELATED 1 229 - -
Mal5g0811 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mal5g0811 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
Mal5g0811 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Mal5g0811 235 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mal5g0811 235 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 229 - -
Mal5g0811 235 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mal5g0811 235 Pfam DnaJ domain 10 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0811 Mal-Chr5 13365942 13369809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0811 12 78 C2H2 Transcription Factor Family AT1G74250 43.284 2.36e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0811 - - lang:109338829 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0811 5 13365942 13369809 Mal5g0811 5 13365942 13369809 ECH