Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0809 ATGGATGACGACGACGAGATCCATTCAATTCATTCGATCCACTCGAATCCATCGCCGGCGAGTAGATCTCCGTCTCCGGTGTCATCTCCGGGAGCGATCGGTCGGGTTTCGGTGACGGTTGCAGCACCGGCGGCGAACAGCTATGCATTAGCGCTTCCGATTCAGAATCAGTCACGAGGAAGCAACGGTGGAGGGAGGGAGGATTGTTGGAGCGAAGCTGCAACGGCGGTGTTGATTGAAGCGTGGGGAGAGAGGTATATGGAATTGAGCAGAGGGAATTTGAAGCAGAAGCATTGGAAAGAGGTGGCGGAGATTGTTAATGGAAGAGGTGATTATTTGAAAGCGCCGAAAACTGATATTCAGTGTAAAAATCGGATCGATACGGTTAAGAAGAAGTATAAATCGGAGAAAGCTAAGATCGGTGCCGGAGGTGGCTCCGGTGGTGTTAGAACAAGCAATTGGCGGTTTTATGATCGGTTAGATGAGCTAATCGGTCCGACCGCTAAGATCAGTGGTGTTTCCGGTAACAGGAATACCGGAAACAGTAATTTGCCACCGCAGGAAGTTCCGTTAGGAATTCCTGTTGGTCTTCGCGCCTCTGGAGCTAGAGGCGCGAATTCTCAGAAGAAAGCTCAGAATCAGATTCAACAAGTTCAGTTGAATTATCAGAAGATTCAGCTCCGACCGCGAGTTTCACAGCTGAATTCTTCTGATAATTCATCTGAAAAAGAAGCGTTGTCTCCGGTGTCAAGCGACAGTTTACCACCACCGCCGGAGAGGAAGAGAGCAAAAGTGATGAATTCGAATTCAAAGGGGAAAGGTTGGGGAAGTGCGGTGAGGGAATTGACTCAAGCAATTGTGAAATTCGGTGAAGCTTATGAACAAGCGGAGACGTCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACTCAGGTAGAGATTTCACAGTTGAAACTTGGAAGAAAAAGTGTTAATGTTAATGGTAACACAAGTAATCATCATCAAAACAACAACAACGTAAGCAACAACAACAATAGCAACCATAACAATAACAGTGACAGTGAGTGA 1125 0.4676 MDDDDEIHSIHSIHSNPSPASRSPSPVSSPGAIGRVSVTVAAPAANSYALALPIQNQSRGSNGGGREDCWSEAATAVLIEAWGERYMELSRGNLKQKHWKEVAEIVNGRGDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIGAGGGSGGVRTSNWRFYDRLDELIGPTAKISGVSGNRNTGNSNLPPQEVPLGIPVGLRASGARGANSQKKAQNQIQQVQLNYQKIQLRPRVSQLNSSDNSSEKEALSPVSSDSLPPPPERKRAKVMNSNSKGKGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKSVNVNGNTSNHHQNNNNVSNNNNSNHNNNSDSE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0809 374 Coils Coil 208 228 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 1 30 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 230 248 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 230 276 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 343 374 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 12 30 - -
Mal5g0809 374 Pfam Myb/SANT-like DNA-binding domain 67 163 IPR044822 -
Mal5g0809 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 337 - -
Mal5g0809 374 MobiDBLite consensus disorder prediction 168 213 - -
Mal5g0809 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 337 IPR044823 -
Mal5g0809 374 MobiDBLite consensus disorder prediction 171 186 - -
Mal5g0809 374 Gene3D - 70 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0809 Mal-Chr5 13312975 13314099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0809 34 356 Trihelix Transcription Factor Family AT3G14180 48.175 5.00e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal5g0809 Myb_DNA-bind_4 4.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0809 - - cam:101508093 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0809 5 13312975 13314099 Mal5g0809 5 13312975 13314099 ECH