Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0785 ATGTCAAATTTAACAAATATTGTGTCAGATGGCCGGAGAGTAGCTGGTAAGGCACCGGAGAAGTTCAAATTTTCACAAACTTGTAGCATGTTGAGTCAGTTCTTGAAGGAAAAGAGAATTTCTGGTGATTCTACACCTGGTTTGTTTGGGAAAATGGACCCTAAAGCAAGTGCAAAGGGTTTGTTAGCCAACATGCAAAACTCAGATGGGGGTTTAAGATTAAATGCATCTGCTATAGATTCTCTTCCTCAGCTTGTGGAAAATCCCTGCATTAAGAAGTCTAATACAAGATCAACAGGTTCTGAAACTCCCCAGTTGACAATATTCTATTCCGGAAAAATGTTAGTATTCGATGCTTTCTCGCCTGCGAAAGCAACCGAGATCATGGAATTGGCCACCAAGTTAGCCTCTGACAATCCAAGCACCGAAGAAAATCCCCCTAGTGCACCTGTCACTAATGAAAAATCAAAAGAGTCCGAAATTCCTAAGACAAACACTGCTTTACAAACAACTGAACAAGGAAACCAAGCCAATTGTTCAGATATGAGATATCCAAGAAGAGCTTCACTTCTTAAATTCCTTGAGAAAAGAAAAGAAAGGGTCATTGCTAGAGGACCTTACCAAATTAACAATAATTCCAAAAATGATGGTAGTAGTTCAGGAAGTGAACCTAAAGGCCAATCTTCCGATCAATTCGACCTTAACTTATAG 711 0.3952 MSNLTNIVSDGRRVAGKAPEKFKFSQTCSMLSQFLKEKRISGDSTPGLFGKMDPKASAKGLLANMQNSDGGLRLNASAIDSLPQLVENPCIKKSNTRSTGSETPQLTIFYSGKMLVFDAFSPAKATEIMELATKLASDNPSTEENPPSAPVTNEKSKESEIPKTNTALQTTEQGNQANCSDMRYPRRASLLKFLEKRKERVIARGPYQINNNSKNDGSSSGSEPKGQSSDQFDLNL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0785 236 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 226 IPR040390 -
Mal5g0785 236 MobiDBLite consensus disorder prediction 135 155 - -
Mal5g0785 236 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Mal5g0785 236 MobiDBLite consensus disorder prediction 206 236 - -
Mal5g0785 236 Pfam tify domain 102 132 IPR010399 -
Mal5g0785 236 SMART tify_2 99 134 IPR010399 -
Mal5g0785 236 MobiDBLite consensus disorder prediction 135 184 - -
Mal5g0785 236 MobiDBLite consensus disorder prediction 162 182 - -
Mal5g0785 236 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 10 226 - -
Mal5g0785 236 MobiDBLite consensus disorder prediction 201 236 - -
Mal5g0785 236 Pfam Jas motif 186 208 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0785 Mal-Chr5 12929841 12931732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0785 12 214 Tify Gene Family AT1G19180 33.188 8.25e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal5g0785 tify 4.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0785 K13464 - gmx:100778559 304.679