Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0755 ATGCCTTCAAAGAAAATTCATTGGAAATCCTTTGTACTTGGTTGTTTCAAAGACAAAAACCCTTCATTGGAAACACCAAAATTTGTTTCAAAAAAGACAGGCTCATGTAGAATTTCTCTATCTGATTTAAGTGATTATTCATCACCTTCTGTCATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCATATTTTCACTTGCAAGGAACTTGAAGAGATCACAAACAACTTCAACAAATCAAATTTTCTTGGAGAAGGTGGATTTGGAAAGGTATACAAAGGTTTTATTGATGATAAACTTAGGCCTACACTTGTTCCTCAAGCTGTAGCTGTTAAAGCCTTAAACTTGGATGGAAAACAAGGACATAGAGAGTGGTTGGCTGAAGTTATCTTTTTGGGGCAGTTGAAGCATCGCAATCTTGTTAACTTAATTGGCTATTGCTATGAAGATGAAAATAGACTTCTTGTGTATGAATACATGGAGAGAGGAAGTCTTGAAGAAAAACTTTTCAAAGGTTATTTAGCAACTTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGACTAGCTTTTCTTCATGAAGAAGAGAAACCAGTTATATATAGAGATGTTAAAGCCTCAAACATTCTTTTGGATGCTGATTATAATGCTAAGTTGTCAGATTTTGGTTTAGCAATTGATGGACCAGATAAAGATCAAACACATATTACAACTCGTGTGATGGGTACACATGGATATGCTGCTCCTGAATATATCAATACAGGTCGTTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTAGAGCTACTAACAGGAAAGAAATCAGTGGACAAAAAAAGACCTCCAAGAGAGCAAGATTTAGTAGAATGGGCAAGACCATCATTGAAGGATTCACACAGACTTGAAAGAGTAATTGATTCAAGACTAGAGGATCAATACTCAATTGAAGGTGCTAGAAAATTAGCAATCTTGACTTATCAATGTCTAAGTCATCATGATAAAAGTAGACCAACAATGAGAACAGTTGTTAAGACCTTAGAGCATGTCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTGGCTCCTAGTGAAGTAACAAATATTGAAGTGCCACTAAATGTGGATAAAAAAGGAACTGAAAATGAATGTGATGAGAATGAGATCAACAAAGGTGTTGTGAAAACTAAAGATGAAGAAAAGGGAGAGAAAAATGAAAAAGGTCGTAGTGATCGAAAAAGTCGCAGCAGTCGACGACGGGTTAAGTCATTGATGAGGTCCCGTTCTGTTTACTCTGACACTGCGCTGTATAAGACTCTTGGAACTAGTTTGTATTCACCTAAGCAAAGCAAGGAGAAACAACAAGAAGTGGACATTTGCCAATATTAG 1425 0.3565 MPSKKIHWKSFVLGCFKDKNPSLETPKFVSKKTGSCRISLSDLSDYSSPSVMSDLSNSLVGSNLHIFTCKELEEITNNFNKSNFLGEGGFGKVYKGFIDDKLRPTLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCYEDENRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTHGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRPPREQDLVEWARPSLKDSHRLERVIDSRLEDQYSIEGARKLAILTYQCLSHHDKSRPTMRTVVKTLEHVMKLNDIPIGHFVYVAPSEVTNIEVPLNVDKKGTENECDENEINKGVVKTKDEEKGEKNEKGRSDRKSRSSRRRVKSLMRSRSVYSDTALYKTLGTSLYSPKQSKEKQQEVDICQY* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0755 474 CDD STKc_IRAK 85 357 - -
Mal5g0755 474 ProSiteProfiles Protein kinase domain profile. 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0755 474 SMART serkin_6 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0755 474 PANTHER OS01G0588500 PROTEIN-RELATED 28 420 - -
Mal5g0755 474 PANTHER BNAA02G16030D PROTEIN 28 420 - -
Mal5g0755 474 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Mal5g0755 474 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Mal5g0755 474 MobiDBLite consensus disorder prediction 454 474 - -
Mal5g0755 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mal5g0755 474 MobiDBLite consensus disorder prediction 392 439 - -
Mal5g0755 474 MobiDBLite consensus disorder prediction 392 424 - -
Mal5g0755 474 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Mal5g0755 474 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Mal5g0755 474 SUPERFAMILY Protein kinase-like (PK-like) 52 357 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0755 Mal-Chr5 12481309 12483736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0755 65 382 Glycoside Hydrolase AT3G07070 48.457 1.15e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g0755 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0755 - - gmx:100790454 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0755 5 12481309 12483736 Mal5g0755 5 12481309 12483736 ECH
Mal5g0755 5 12481309 12483736 Mal2g1002 2 11764910 11766136 ECH