Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0746 ATGACTATGGAACCAAACCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTCTTGGATGATCCATATAACAATGGTTACATTCAAGAGTATCAGTTATGGAATCAGAATCAAGATATAAGCAACCAGTACCAAACTGATGCAATTATTAGTTCCCCTAATGCTACAAACAGCACAACCAACATTATTGCTGCTAGTACTACTACTACTACCACTAGCACAGCATCTCTTGAGCCTAATAGTTCTAACAACATACCCTTTTCTGATTTTCCGAAGAAACGAAATGCCGAGGATGAATCAAGTCTCAAAAAACAATCACAAAACCAAAAGAACAAGAGAATCAAGAGCCGTCCAACGAATGAATCTGATAATAGAGATGCAGCTCTTGAAGGAACAGTGGTTAGAAAATCTGGTGGGAACAAGAAAGGTGGAGCTAAGGCCAATGGAAATAACAGTAACAATGGAAACAATAAGGATGGTAGCTGGGCTGAGGAGTTGCTCAACCCTTGTGCTGTTGCCATAACCGGTGGAAATCTGAATCGTGTGCAACATCTGTTATATGTTCTCCATGAGCTAGCCTCAACTACCGGTGATGCCAACCACCGGCTAGCAGCGCATGGCCTCCGAGCATTGACACACCATCTATCTTCATCTTCGTCGTCTACCTCGTCAGGGACTATAACTTTTGCATCTACAGAACCGCGATTCTTCCAAAAGTCATTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATTCTTCAAGTTCTAGCTGAAGAGCCGAACAACTCGCGTACCCTTCACATCCTTGACATTGGAGTCTCTCATGGTGTGCAATGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCACCTCTGGTTCGCCTTACTGTCGTTAATGCTTCTTCTTCGACTGAAAATGACCAAAACATGGAGACCCCATTTTCAATAGGTCCGTGTGGTGATAACTTCTCTTCTAGACTCCTTGGTTATGCTCAGTCCATAAATGTCAATCTGCAGATAAACAAGCTTGATAATCATCCATTGCAGATGTTGAATGCTAAAAGTGTTGACACATCCCCCGATGAAACCCTTATTGTATGTGCTCAGTTCAGGTTGCATCACTTGAATCATAACAGTCCTGATGAAAGAAGTGAGTTTCTGAAGGTGTTGAGAGACATGGAGCCTAAAGGGGTGATATTAAGCGAGAACGACATGGAGTGTTGCTGCAGTAGTTGTGGCGATTTCGCCACTGGATTCTCTCGAAGAGTGGAGTACTTATGGAGGTTTTTAGATTCAACCAGTTCAGCATTCAAAAACCGTGAGAGTGATGAAAGGAGAATGATGGAAGGTGAGGCTGCAAAAGCTTTGACAAACCAGCGTGAAATGAACGAAAGGAGAGAAAAATGGTGCGAAAGAATGAAAGAAGCAGGGTTTACAGGAGAAACATTTGGAGAGGATGCAATTGATGGCGGTCGAGCTTTGTTAAGGAAGTATGATAATCATTGGGAGATGAAAGTAGAAGAAGAGAACAGTACAAGTGTGGGACTATGGTGGAAGGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAATTGGATAAACAACCAGAGTAG 1677 0.4275 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYQLWNQNQDISNQYQTDAIISSPNATNSTTNIIAASTTTTTTSTASLEPNSSNNIPFSDFPKKRNAEDESSLKKQSQNQKNKRIKSRPTNESDNRDAALEGTVVRKSGGNKKGGAKANGNNSNNGNNKDGSWAEELLNPCAVAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTSSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVNASSSTENDQNMETPFSIGPCGDNFSSRLLGYAQSINVNLQINKLDNHPLQMLNAKSVDTSPDETLIVCAQFRLHHLNHNSPDERSEFLKVLRDMEPKGVILSENDMECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKNRESDERRMMEGEAAKALTNQREMNERREKWCERMKEAGFTGETFGEDAIDGGRALLRKYDNHWEMKVEEENSTSVGLWWKGQPVSFCSLWKLDKQPE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0746 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 552 IPR005202 -
Mal5g0746 558 MobiDBLite consensus disorder prediction 122 138 - -
Mal5g0746 558 Pfam GRAS domain family 172 552 IPR005202 -
Mal5g0746 558 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 552 IPR030015 -
Mal5g0746 558 ProSiteProfiles GRAS family profile. 162 552 IPR005202 -
Mal5g0746 558 MobiDBLite consensus disorder prediction 78 165 - -
Mal5g0746 558 MobiDBLite consensus disorder prediction 99 114 - -
Mal5g0746 558 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0746 Mal-Chr5 12379956 12381632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0746 2 552 GRAS Transcription Factor Family AT3G13840 50.903 4.06e-176 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g0746 GRAS 6.8e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0746 - - gmx:100806550 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0746 5 12379956 12381632 Mal5g0746 5 12379956 12381632 ECH
Mal5g0746 5 12379956 12381632 Mal4g0444 4 3855862 3857217 PCT