Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0742 ATGACTATTAAGTCCGCCATGGCGTCTCATCTGGCGAAGCTACGGTTGGCAGAATTAGATGACGACAGCGAAGATCTAAAATTTGTGATAACACCGCGTCGTCAAGTAATCGGACCGGACGAAAACAGAATCAAAAAGGTGATTGAATATGAATGGGATGATGATCTTAACATCGTTGAGAAAATAACATCCCCTCGCAAAAGGAAACTCGGTCGTGCGAGTCATATTAAGCGCGCCGAACGACGGGAATGGTCCAAGTTTGGTGATGATGTTAATGGTAATGCTGGCAGTTGGTGTACTATGGTTTCGACTGAAGAGATTTTTCTTGAACGCCCTAAGCCTATTGGTTCCAATAATTTGGAGCAACCGGTTGACCCATCAGGTGCAGCAGGTGGTGTTCTTATGGTATGCAGATCTTGTGGGAAGAAGGGTGAGCATTGGACTTCAAGGTGTCCAAATAAGAATCTCTCAAAATCGAGTGAGGGATTCGTTGATAAGACTCCTCCAGTAGCTGTATCAAATAACGGTGCATATGTACCTCCTAGCTTGAGAGGTGGTGCAGAAAGGAGGCGGAGGAACGATGAGAATTCTGTGCGGGTAACCAACCTCTCGGAGGATACGAGGGAGGCTGATTTGCATGAGCTATTCAGCCCTTTTGGTTCTGTGAGCAGAGTCTATGTTGCTATGGATAAAATTACTGGCGTGAGTAAGGGGTTTGGCTTTCTCAATTTCGTCAGCAGAGAAGATGCTCAGAGAGCTATTAACAAACTCAATGGCTATGGCTATGACCACCTCATCCTCAAGGTTGAATGGGCCACCCCAAGAACAACCTAA 834 0.4592 MTIKSAMASHLAKLRLAELDDDSEDLKFVITPRRQVIGPDENRIKKVIEYEWDDDLNIVEKITSPRKRKLGRASHIKRAERREWSKFGDDVNGNAGSWCTMVSTEEIFLERPKPIGSNNLEQPVDPSGAAGGVLMVCRSCGKKGEHWTSRCPNKNLSKSSEGFVDKTPPVAVSNNGAYVPPSLRGGAERRRRNDENSVRVTNLSEDTREADLHELFSPFGSVSRVYVAMDKITGVSKGFGFLNFVSREDAQRAINKLNGYGYDHLILKVEWATPRTT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0742 277 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 4 276 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mal5g0742 277 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 11 277 - -
Mal5g0742 277 Pfam Eukaryotic translation initiation factor 3 subunit G 35 156 IPR024675 -
Mal5g0742 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 198 263 IPR000504 GO:0003723
Mal5g0742 277 SUPERFAMILY RNA-binding domain, RBD 193 275 IPR035979 GO:0003676
Mal5g0742 277 SMART rrm1_1 197 270 IPR000504 GO:0003723
Mal5g0742 277 PIRSF Transl_init_eIF-3_RNA-bind 5 277 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mal5g0742 277 Gene3D - 154 277 IPR012677 -
Mal5g0742 277 CDD RRM_eIF3G_like 197 272 IPR034240 -
Mal5g0742 277 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 11 277 - -
Mal5g0742 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 274 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0742 Mal-Chr5 12335637 12338800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0742 1 277 Eukaryotic Initiation Factors Gene Family AT3G11400 54.294 2.95e-105 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0742 K03248 - mus:103968973 332.413