Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0741 ATGGTTTCGACTGAAGAGATTCTTCTTGATCGCCCTAAGCCTATTGGTTCGAATAATGGTGCATATGTACCTCCTAGCTTGAGAGGTGGTGCAGAGAGGCGGAGGAACAATGAGAATTCTGTGCGGGTAACCAACCTCTCTGAGGATACGAGGGAGGCTGATTTGCATGATAGGGGGTTTGGCTTTGTCAATTTCGTCAACAGAGAAGATGCTCAGAGAGCTATTAACAAACTCAATGGCTATGGCTACGACAACCTCATCCTCAAGGTTCAATGGGCCACCCCAAGAATAACCTAA 297 0.468 MVSTEEILLDRPKPIGSNNGAYVPPSLRGGAERRRNNENSVRVTNLSEDTREADLHDRGFGFVNFVNREDAQRAINKLNGYGYDNLILKVQWATPRIT* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0741 98 MobiDBLite consensus disorder prediction 1 40 - -
Mal5g0741 98 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 15 57 - -
Mal5g0741 98 SMART rrm1_1 40 91 IPR000504 GO:0003723
Mal5g0741 98 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 95 IPR000504 GO:0003723
Mal5g0741 98 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 57 97 - -
Mal5g0741 98 SUPERFAMILY RNA-binding domain, RBD 36 96 IPR035979 GO:0003676
Mal5g0741 98 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 85 IPR000504 GO:0003723
Mal5g0741 98 Gene3D - 30 97 IPR012677 -
Mal5g0741 98 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 15 57 - -
Mal5g0741 98 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 57 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0741 Mal-Chr5 12330001 12331771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0741 16 98 Eukaryotic Initiation Factors Gene Family AT3G11400 60.177 6.98e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0741 K03248 - bvg:104900048 123.25