Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0722 ATGATGAGTGCAAGTTCAAGAAATAGGTCTCTTTTCACACCAAATCAATGGCAAGAACTTGAACAACAAGCCCTTGTTTTCAAATACATGGTTACCGGAACACCTATTCCTCCGGATCTCATATACTCTATTAAGAGAAGTTTAGACACTTCAATATCTTCAAGAATCTTTCCACATCCACCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCAAAGTACTGTGAAAGACACATGCACAGAGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTAGTAGTTTCTTCTTCTTCAACAACACCATCATCAAATAACAACACAAACACAGCTTCTTCTTCTTCTTACAACAGAAACCTCTCCTTGAACAACAACAGCAACATAACCTCACCTTCTTCTTTCCCTTTCTCTACTTCTTCCATAGCTTGTCATGAGTCACAATCTTACCAAAACTCTTCTTTAAACCCTTACTATTACTCTCAACCAATTACCTCTTCTAAACCACTTGATCATTCTGATTTTCAAACTCAAGATGCTACTACTCATCACCACTTTTTGGATTCAACATCTTATTCTCATGATAACAAGGACTATAGGAGGCATGTTCAAGGAATAAGAGATGGTGTGGATGAGAGAACTTTCTTTCCAGAAGCAACAGGAACATCTAGGAGCTGCTATCATGATTCATATCAGCAACAACTATCAATGAATCCCTTTAAATCTTATTCAAGCTCACAGTTTCAGAATATCAATGATAATAATCCAAGACAACAACAAGAACAACACTGTTTTGTTTTAGGCACTGATTTCAAGTCAACAAGAACAACAAACAAGGACAAAGAAAGTGAGACAACTCAAAAACCACTTCATCATTTCTTTGGTGAGTGGACACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATTCCAACAGATGAGTGA 1035 0.3865 MMSASSRNRSLFTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRIFPHPPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVELVVSSSSTTPSSNNNTNTASSSSYNRNLSLNNNSNITSPSSFPFSTSSIACHESQSYQNSSLNPYYYSQPITSSKPLDHSDFQTQDATTHHHFLDSTSYSHDNKDYRRHVQGIRDGVDERTFFPEATGTSRSCYHDSYQQQLSMNPFKSYSSSQFQNINDNNPRQQQEQHCFVLGTDFKSTRTTNKDKESETTQKPLHHFFGEWTPKNTDSWLDLASNSRIPTDE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0722 344 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g0722 344 MobiDBLite consensus disorder prediction 118 151 - -
Mal5g0722 344 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g0722 344 Pfam WRC 77 119 IPR014977 -
Mal5g0722 344 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal5g0722 344 PANTHER - 1 343 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal5g0722 344 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 343 - -
Mal5g0722 344 MobiDBLite consensus disorder prediction 103 151 - -
Mal5g0722 344 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0722 Mal-Chr5 12049843 12051407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0722 3 322 GRF Transcription Factor Family AT3G13960 40.921 1.09e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal5g0722 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0722 - - vun:114166369 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0722 5 12049843 12051407 Mal5g0722 5 12049843 12051407 ECH