Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0721 ATGAGTAACTGGTTAGGATTTTCTCTCACTCCACACTTGAGGATTGATGAAGAATTTGGTAGAGAAAACCAAAACCAAAACCATGGAGTTGAAGGATCAGAAATAGGAAGAAACTATGTTCCTCCTTCTTCTCATCACTTATCTATTATGCCTCTACGCTCTGATGGTTCACTTTGTGTTTCTGATTCCTTTACTCCTCAAGAATGGAGATATGAGAATGCAATAACAGATGGAAATTCAAATGAAGAAGGACCAAAACTTGAAGATTTTTTGGGATGTTACTCAAACCAAAACCAAAATAGTACTACTACTACTATGTCTAAAATCAATGTTAATGTGTCACCAAATTTTTGTACCAATAATAATACAGAGATTGAAACAGGGGAGAATATAACAAACCAATCTTTGATTCACTCTTTTCATGCATATAATGATAACAACAACAACAATCATCATGCTTTAATCCATGATAATAGTATGTACAAATCTTGGATGACTCAAAATCAGTTTTCTTCTGAGGGGAAAACAACTTCTAGTGATGGAAATGGTTGTGGTTTTCAATCTCTTAATTTGACTATGAGTCCTAGTGTGCAAAATGGTGTTGTTGGTGCTGGTGCAATTTCTAATGTTCATGTGAATGAAGATCCTAGGAAAAGGTCTTTGTCAAAATCTAATGCTAGAGAACCTGTCCCTCGTAAATCTATTGATACTTTTGGACAGAGAACTTCTCAATATCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCACATTTGTGGGATAATAGTTGCAGAAAAGAAGGGCAAACAAGGAAAGGAAGACAAGTTTACCTTGGTGGTTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTGAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGATAAGGAGCTTGAAGAAATGAAGCACATGACAAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCTCGGATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAAGAGGAGGCTGCAGAAGCATATGATATTGCAGCAATCAAATTCAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTCAAGAGAATTTGCTCAAGCTCAACCCTAATTACCGGAGATCTCGCAAAACGTTCTCCTAAAGACTTGGCTCCTCCTGCAGCCACAGCCGAGGACTTCAATTCGTGTGGCAGTTCATCGACACCTTCTCATCAGCCGCCTCCTCTGGCTATTACCGATGGTGAACAACATTCCGATGAATTGTCCAACATGGTGTGGAATTCCAACAACGACGAGCAAAAACCGCAGAACGAATGTGGAAACACCAACAACATCGCTGAATCATCGCAGCACGGTTCACCAAGCAACAAGAATGAGATGAACCCTCAAAGTCCTAAATGTTCATTGGGACTACCTAATGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGTTACTTCACACTGCATGGACCAAAATTTGATGATGGAAGCAATGAAAATGACCACATGAACAACAACAGGCTTGGAAATTTGGGTTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1728 0.3981 MSNWLGFSLTPHLRIDEEFGRENQNQNHGVEGSEIGRNYVPPSSHHLSIMPLRSDGSLCVSDSFTPQEWRYENAITDGNSNEEGPKLEDFLGCYSNQNQNSTTTTMSKINVNVSPNFCTNNNTEIETGENITNQSLIHSFHAYNDNNNNNHHALIHDNSMYKSWMTQNQFSSEGKTTSSDGNGCGFQSLNLTMSPSVQNGVVGAGAISNVHVNEDPRKRSLSKSNAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYDKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLITGDLAKRSPKDLAPPAATAEDFNSCGSSSTPSHQPPPLAITDGEQHSDELSNMVWNSNNDEQKPQNECGNTNNIAESSQHGSPSNKNEMNPQSPKCSLGLPNEFGVSGADYGHGYFTLHGPKFDDGSNENDHMNNNRLGNLGLVNQVPMFALWNE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0721 575 MobiDBLite consensus disorder prediction 19 42 - -
Mal5g0721 575 MobiDBLite consensus disorder prediction 426 521 - -
Mal5g0721 575 MobiDBLite consensus disorder prediction 465 517 - -
Mal5g0721 575 PRINTS Ethylene responsive element binding protein signature 386 406 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 PRINTS Ethylene responsive element binding protein signature 245 256 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 Gene3D AP2/ERF domain 243 312 IPR036955 GO:0003700|GO:0006355
Mal5g0721 575 Gene3D AP2/ERF domain 346 406 IPR036955 GO:0003700|GO:0006355
Mal5g0721 575 CDD AP2 345 406 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 Pfam AP2 domain 244 302 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 Pfam AP2 domain 345 396 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 SUPERFAMILY DNA-binding domain 345 406 IPR016177 GO:0003677
Mal5g0721 575 MobiDBLite consensus disorder prediction 213 235 - -
Mal5g0721 575 CDD AP2 243 312 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 509 - -
Mal5g0721 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 4 509 - -
Mal5g0721 575 MobiDBLite consensus disorder prediction 213 230 - -
Mal5g0721 575 ProSiteProfiles AP2/ERF domain profile. 346 404 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 ProSiteProfiles AP2/ERF domain profile. 244 310 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 SUPERFAMILY DNA-binding domain 243 312 IPR016177 GO:0003677
Mal5g0721 575 SMART rav1_2 244 316 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 SMART rav1_2 346 410 IPR001471 GO:0003700|GO:0006355
Mal5g0721 575 MobiDBLite consensus disorder prediction 441 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0721 Mal-Chr5 11996657 12000554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0721 1 429 AP2-EREBP Transcription Factor Family AT1G72570 51.429 4.43e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal5g0721 AP2 6.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0721 K09285 - gmx:100805489 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0721 5 11996657 12000554 Mal5g0721 5 11996657 12000554 ECH