Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0710 ATGCACAGTATTAAACTTGTACTATTTTTTGTTTATCTTCTTTTGTTTATGTCAAAATTGAAAGGTGAAGTGGAAAACCCAACATCATACATAAATTTTCCCTATTCATCGGAATTTCAATCTTCTGTTCCTCAAAGTCACTATGATGTCTTTGTTAGCTTTAGGGGTCTAGACATACGTGATGGTTTTCTTAGCCATTTGGTTGAAGCTTTATCTCGAAAGAGAATTGTTATCTTTGTAGATAATAAGCTTAAAAAAGGAGATGAAATAGCACAATCACTTCTTGAAGCTATTGAAAAATCTTTGATTTCTTTGGTTATATTTTCACAGAATTATGCTACTTCATCGTGGTGTTTGGATGAGCTAGTTAAAATTGTTGAGTGTAGAGAGAAAGATGGACAGATTTTATTGCCTATTTTCTACAAAGTTGATCCTACAATTGTGAGGCATCAAAAAGGAACTTATGCGAATGCATTTGCAGAACATGAAGAAAAGTTAAAGTACAATTTCACCAGGCTGCAACAGTGGAGATCTGCTTTGAAGAAATCTGCAGATATCTCAGGGTTTCATTCATCACAATTTTTGTCTGATGCTGAACTTATTGAAGAAATAGTTAAAAGTGTGTTGAAGAGGTTGGAACATGTGCGTATAGTTAATTCAAAAGGACTTGTTGGAATTGAAAAACAAGTTTCACATGTGGAATCATTGTTACAAGTAGAGTCACAAGATGTTCGTGCTATTGGAATTTGGGGCATGAGTGTTATAGGAAAGACAATTATTGCAGAAGACATATATAAGAGGCTATGTTCTGAATATGAAGGTTGTTACTTTAAGGCTAATATAAGAGAAGAATGGGGAGGCTTAGGACATGGAAATATGTATTTAAAGAAAGATCTTTTTTCTACTCTATTAGGAGAACAAGATTTGAAAATTGACACACCACATGGATTACCCTATTTTGTTGCGAGGAGGCTTCGTCGTATGAAGGTTCTTGTTGTTCTTGACGATGTCAACGATCCACAACAACTAGAAACTTTGGTTGGAACACTTGATTGGTTTGGAACAGGTAGTAGAATCATTGTAACAACTAAAGATAAGCAAGTAGTTGCCAAAATGGTTGTTGATAATGAAAAATATGAAGTTATAGCATTAGACTTTGATGACTCTTTTCGGCCAATAAGCATCTCACAGTGTCTCAATATCACTCAACATATGGAAATGGCTCATGAAGGTTCAAATATCTCAAATTCTATATCACTCAACACATTGAAATGGCTCATGAATATATGTCTCAATATCACTCAACACATGGAAAGGGCTCATGAGGGTTCAAATATCTCAAATTCTATATCATTCATGATTGATGTAATTTATAGAATTGCATTAACAATTTTCATAGGTTTAGTCATATATAATGTGCTTTACTTTTCCATTGACGTTTTCATGGCATTAGTCAATTTAACTGTGTTTTGCTTTTGCATTTACGTGCCCATACAAGTTCTATTGTGGATGCTATCCTTTTTTAATTAA 1530 0.3366 MHSIKLVLFFVYLLLFMSKLKGEVENPTSYINFPYSSEFQSSVPQSHYDVFVSFRGLDIRDGFLSHLVEALSRKRIVIFVDNKLKKGDEIAQSLLEAIEKSLISLVIFSQNYATSSWCLDELVKIVECREKDGQILLPIFYKVDPTIVRHQKGTYANAFAEHEEKLKYNFTRLQQWRSALKKSADISGFHSSQFLSDAELIEEIVKSVLKRLEHVRIVNSKGLVGIEKQVSHVESLLQVESQDVRAIGIWGMSVIGKTIIAEDIYKRLCSEYEGCYFKANIREEWGGLGHGNMYLKKDLFSTLLGEQDLKIDTPHGLPYFVARRLRRMKVLVVLDDVNDPQQLETLVGTLDWFGTGSRIIVTTKDKQVVAKMVVDNEKYEVIALDFDDSFRPISISQCLNITQHMEMAHEGSNISNSISLNTLKWLMNICLNITQHMERAHEGSNISNSISFMIDVIYRIALTIFIGLVIYNVLYFSIDVFMALVNLTVFCFCIYVPIQVLLWMLSFFN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0710 509 PRINTS Disease resistance protein signature 246 261 - -
Mal5g0710 509 PRINTS Disease resistance protein signature 324 338 - -
Mal5g0710 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 391 IPR044974 GO:0006952
Mal5g0710 509 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 40 391 - -
Mal5g0710 509 Gene3D - 45 216 IPR035897 -
Mal5g0710 509 Pfam NB-ARC domain 228 391 IPR002182 GO:0043531
Mal5g0710 509 Gene3D - 217 382 IPR027417 -
Mal5g0710 509 SMART till_3 47 186 IPR000157 GO:0007165
Mal5g0710 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 394 IPR027417 -
Mal5g0710 509 SUPERFAMILY Toll/Interleukin receptor TIR domain 42 189 IPR035897 -
Mal5g0710 509 ProSiteProfiles TIR domain profile. 46 212 IPR000157 GO:0007165
Mal5g0710 509 Pfam TIR domain 48 216 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0710 Mal-Chr5 11865827 11867825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0710 34 390 WRKY Transcription Factor Family AT4G12020 32.402 7.27e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0710 - - cam:101503346 460.685