Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0709 ATGTCTGGATTTGATTCATCACATTTTTCGGATGATGCTAAGCTTGTTGAAGAAATAGTTAAAAATGTGTTGAGGAAATTGAATCAAGTGGACCAAGGTAAGTCAAAAGGACTTGTAGGAATTGAAAAGCAAATTTCACCTATAGAATCATTGTTACATTTAGAGTCAGAAGATGTTCGTGTTCTTGGAATTTGGGGCATGCCTGGTATTGGTAAAACAACTATTGCTGAAGAAGTATTTCGTAGACTACGTTCTGAATACGAAACTTGTTGTTTTATGGCTAATGTAAGAGAAGAGTCAGAAAGATATGGAACAAACAATTTGAGGTTAAGAAAAAAGCTTTTATCCACTCTACTAGAGGAAGAAGATTTGATAGATGACATGATAAATGGATTACCTCCTTTGGTTAAGAAAAGGCCTAGCCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAAGATGCAGAGCAACTAGAAGTTTTGGTTGGAACAGTTGATTGGTTAGGACCAGGAAGTAGAATCATCATAACTACCAGAGATAAGCAAGTACTTTCTGGAAAAGTTGATGATATATATGAGGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAACTTGCATGCATTTAATAAACAAAAGCATCTTGAAATGGAGTACTATAAGCTATCAAAGAAAATGGTGGATTATACCGCAGGTGTTCCACTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGGGAAAGATAAAGCCTTATGGGAAAGTCAAGCAAGGAATCTGAAAATAGAGCAGATTGAAAATGTCCATGATGTTTTTAGATTGATATACACTAATCTTGATTATTATGAAAATATTATATTCTTAGACATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGAACTCATAAATCTTCTATTGAAAGATCATCATTATTCAGTGAGCACTAGATTGGAAAGGCTAAAAGATAAAGCTCTTGTAACTATTTCTCAACAAAGCATTGTATCAATGCATGACATTATACAAGAAACAGCTAGGGAGATTGTTCGCCAAGAATCTGTTGATGAACCTGGAAGCCGAAGCCGACTATTGGATCCTGATGACATTTATCATGTATTGAAAGATGACAAGGGGAGTGAGGCCATCAGAAGTATGGCCATCAGACTATCTGAAATTAAGGAGCTGCAGTTAAGCCCTCAAGTATTTGCCAAGATGAGTAAATTGAAATTTTTGGATATTTACACTAAGGGGTCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTTGAATCCTTGCCTAATGAACTTAGATATCTTCGTTGGGAGTATTACCCTTTGGAATTCTTGCCATCCAAGTTTTCTGCAGAAAACCTTGTTACATTGAATTTGCCTTATAGCCGACTGAAAAAACTTTGGCATGGAGTGAAGGTATACAATATATATAGTCTAAAATATATTTTTCATCTAATTGCTTTTGGTCCCCAAAAACTGAGATTGAATTGGCTCACAACTCACAAGTCTTGTCTTGGTTGGTTCTAA 1548 0.3579 MSGFDSSHFSDDAKLVEEIVKNVLRKLNQVDQGKSKGLVGIEKQISPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYETCCFMANVREESERYGTNNLRLRKKLLSTLLEEEDLIDDMINGLPPLVKKRPSRMKVLIVLDDVKDAEQLEVLVGTVDWLGPGSRIIITTRDKQVLSGKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSKKMVDYTAGVPLVLKALANLLCGKDKALWESQARNLKIEQIENVHDVFRLIYTNLDYYENIIFLDIACFFDGLKLKLELINLLLKDHHYSVSTRLERLKDKALVTISQQSIVSMHDIIQETAREIVRQESVDEPGSRSRLLDPDDIYHVLKDDKGSEAIRSMAIRLSEIKELQLSPQVFAKMSKLKFLDIYTKGSQNEGSLSLPQGLESLPNELRYLRWEYYPLEFLPSKFSAENLVTLNLPYSRLKKLWHGVKVYNIYSLKYIFHLIAFGPQKLRLNWLTTHKSCLGWF* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0709 515 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 483 - -
Mal5g0709 515 Gene3D - 197 281 IPR042197 -
Mal5g0709 515 Gene3D - 15 191 IPR027417 -
Mal5g0709 515 SUPERFAMILY "Winged helix" DNA-binding domain 269 376 IPR036390 -
Mal5g0709 515 Gene3D Ribonuclease Inhibitor 377 493 IPR032675 -
Mal5g0709 515 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 483 IPR044974 GO:0006952
Mal5g0709 515 Pfam Leucine Rich Repeat 460 479 IPR011713 -
Mal5g0709 515 SUPERFAMILY L domain-like 389 489 - -
Mal5g0709 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 291 IPR027417 -
Mal5g0709 515 Pfam NB-ARC domain 55 269 IPR002182 GO:0043531
Mal5g0709 515 PRINTS Disease resistance protein signature 139 153 - -
Mal5g0709 515 PRINTS Disease resistance protein signature 405 421 - -
Mal5g0709 515 PRINTS Disease resistance protein signature 61 76 - -
Mal5g0709 515 PRINTS Disease resistance protein signature 232 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0709 Mal-Chr5 11862074 11863788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0709 12 480 WRKY Transcription Factor Family AT4G12020 40.127 7.16e-98 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0709 - - mtr:MTR_8g020360 790.03