Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0707 ATGGAAACAGTGGTTGGAATTGAGGATAATGAGGATGGGAAGCTTGAAGACAGTGGGATTGATAGAAGCAGTCATGCTTTGTCTTCACCTAAGCGGATTTCCAATCCAGTTGTGTACAAACTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTTGAGGATTTTCTTGAATATGAAAACAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTATGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTAGAGTGCTCAGAAGGTGTTTCACAATTAGGCACTGCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGTATATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGGTCACCTGTTCATTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTACTGTCAGAAATGAGAAGGGTCTGTCTGAAACTCCCTACCAGGAAGCACATTCTATAGCATCAAGTTTAATTTATAGTCATAGTAATCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCCGAAGCACTGATAGAAAGTGGTTCGTCTGCTTCTGCTGTCAATTCCGCTTTGAAGCATGATTTTTCCATGACAGACGGAGAAATATGTTTGGATAAGTTGTCGATCAAAGAACTTCATGAACTGTTTAAGGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAAAAGGAGGATTGCTATGAGTTTAACTAACTCATGCGATGTTTCAGCGACAACATTTACTGTTAAAGATAACAAAATAACTAGAAAATGTGAAGAAGAATGTGCTAGAAATTTGAATGCTGCAGCTGCAATCTCTGCGGAAAATATGGCTGTAGAAGGGGATGTCAAGTATAATGATTCAAATGCAGTGGAGGGTTGCGAAGTTTATGATAACCAAGCTGCTTCTGAAACAATACTGGAAAATCTTAATATGGAACATGAAATAGGAGATGAGGATCAGCAGAGAGAACAAAGAGCTGCAAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGCACAATCCTAGGTCGTCAAGCTCTAATAAAAGTACGGGACACAGACATGCTTCTCCAACATCTTACGTCGGGCCTGCTAGGAATGCTTTTCCAGAGACAAGAACATTTATCACCAGGTTAGACTCTCTTGGAGGTTCTGGTGTCCAAATTCCTTGTGTTTCTCGGGTTCGAAGAAGTCGTCCAAGGAAAAATATCACATCTCTTATGAAATTCCATCCAACTGGCATGGGCGAGGCTGTAAAATTAGGCAATAAAGTTGTTAGCGATCATGGTTCTGATGCTGATAGTGAAATTGAGGACAAAGTCTCAAAGCCAAGATCCGTGCCTGTGAAGGTTTATCAGACGTCTACTTCTGAGTCTAAGAAAGAGAAGAAGCAGTATCCGGTAATAATTGGCACAACTGAACCAAGGCAGGAATTTTGGCCAAAAAAGATAGATGCATCTAGTCATGCCGCAGAGGGAAATATAGTTACTATTCCCACTGCTAAAGGTGGAATAAGGAGGAAGCATCATCGAGCATGGACCCTTGTCGAGGTAATGAAACTGGTTGATGGTGTGTCGAGGTGTGGACCAGGGAGATGGTCTGAGATCAAACGGCTCTCCTTTTCTTCGCACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACCGACACCTGCAGATGAGGCGATGAATTCGCGGAAGCATGGTACAGCTCCGATTCCTGAGCCGATTTTAGTACGTGTAAGAGAGCTTGCCGAGATAAATTCTCAAGTACCTCCAAATTCCAGCTCAAGCAAGTTCACAGCTAATGGTGCAACTAATGGTGCAAAGAGTATGCATGGAGACAGAGTGGGGTATTTGTAG 2013 0.4237 METVVGIEDNEDGKLEDSGIDRSSHALSSPKRISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSMECISIERSSSGKLRLECSEGVSQLGTAEADLGKLNAKFQYIEQMLQKVKQEEKLRLSSRSPVHSHVQIDSQCSADKFTVRNEKGLSETPYQEAHSIASSLIYSHSNQSGSIDQCSRPSEALIESGSSASAVNSALKHDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTVKDNKITRKCEEECARNLNAAAAISAENMAVEGDVKYNDSNAVEGCEVYDNQAASETILENLNMEHEIGDEDQQREQRAAKRMRKPTKRYIEELSENESREHNPRSSSSNKSTGHRHASPTSYVGPARNAFPETRTFITRLDSLGGSGVQIPCVSRVRRSRPRKNITSLMKFHPTGMGEAVKLGNKVVSDHGSDADSEIEDKVSKPRSVPVKVYQTSTSESKKEKKQYPVIIGTTEPRQEFWPKKIDASSHAAEGNIVTIPTAKGGIRRKHHRAWTLVEVMKLVDGVSRCGPGRWSEIKRLSFSSHSHRTSVDLKDKWRNLLKASFAPTPADEAMNSRKHGTAPIPEPILVRVRELAEINSQVPPNSSSSKFTANGATNGAKSMHGDRVGYL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0707 670 MobiDBLite consensus disorder prediction 342 383 - -
Mal5g0707 670 MobiDBLite consensus disorder prediction 639 670 - -
Mal5g0707 670 PANTHER TRF-LIKE 3 1 669 - -
Mal5g0707 670 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 669 - -
Mal5g0707 670 SMART sant 549 602 IPR001005 -
Mal5g0707 670 Gene3D - 541 648 - -
Mal5g0707 670 ProSiteProfiles Myb-like domain profile. 553 600 IPR001005 -
Mal5g0707 670 MobiDBLite consensus disorder prediction 467 485 - -
Mal5g0707 670 MobiDBLite consensus disorder prediction 7 21 - -
Mal5g0707 670 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 545 604 IPR017930 -
Mal5g0707 670 SUPERFAMILY Homeodomain-like 547 611 IPR009057 -
Mal5g0707 670 MobiDBLite consensus disorder prediction 467 498 - -
Mal5g0707 670 MobiDBLite consensus disorder prediction 342 406 - -
Mal5g0707 670 MobiDBLite consensus disorder prediction 1 29 - -
Mal5g0707 670 MobiDBLite consensus disorder prediction 639 658 - -
Mal5g0707 670 CDD SANT_TRF 551 601 - -
Mal5g0707 670 Pfam Myb-like DNA-binding domain 552 600 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0707 Mal-Chr5 11801733 11809395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0707 553 599 Single Myb Histone (SMH) Gene Family AT1G72740 46.939 7.06e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g0707 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0707 - - mtr:MTR_8g020330 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0707 5 11801733 11809395 Mal5g0707 5 11801733 11809395 ECH