LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g0698	ATGGTACCTAGTGGCATATTCAAGAGAACATTCTCAAACGATGTTATGTGTTTTATTGTCTGTCTCTTGATTGTTTCACTATTACATGAAGCACCAACAGCATCATCAGACAACAAAGATTCTGTGATATTTAATCCTCAGATTAAGTACGATGTTTTTGTTAGCTTTCGAGGTTCTGACATACGCCGAGATTTTCTTAGCCATTTAACTGAAGCTTTCACACGAAAGCAAATTTTTGCCTTCGTTGATACTAGGGTTCGTAGAGGAGATAAAATATCACCATCACTTGTTAAAGCAATTGAAACATCGTTGATTTCTTTGGTCATATTTTCACAGAATTATGCTTCTTCACCGTGGTGTTTGGATGAACTTGTCAAAATTGTTCAATGCAGAAAAAAAGATGGACAAATTTTATTGCCTGTCTTCTACAAAGTGGACCCAACAAGTGTGAGGCATCAAAGGGGAACTTATGCAAATGAATTTGGTAAACATGAAAAAAAGTACAATTTGAGTAGGGTGCAAAATTGGAGATCTGCTTTGAAGGAATCTGGTAATATCTTGGGATTTCACTCATCACATTTTCCGAGTGACGCTGTACTTGTTGAAGAAATAGTTAAATGTTTGATGAAGAGGTTGGATCATGTACAACAAGTTCACTCAAAAGGACTTGTCGGAATTGGCAAACAAATTTCACATGTGGAATCATTGTTACAGACAGGTTCAAAAGATGTCCGCGCCATTGGAATTTGGGGGATGAGTGGTATAGGTAAAACAACTATTGCAGAACAAGTTTATAGCAGGCTACATTCTGAATATGAAGGTTGGTACTTTAAGGCTAATGTAAGAGAAGAATGGGGAAGACATGGATATATGTATTTAAAGAAAGAGCTTTATTCTACTCTATTAAAGCAACAAGATTTGGAAATTGACACACCTCATGGATTGCCACCTTCTGTTCAGAGGAGGCTTCGTCGTATGAAGGTTCTTGTTGTTCTTGACGATGTCAATGATCAAGAGCAACTAGATATTTTAATTGGAACACTCAATTGGTTTGGAAATGGTAGTAGAATCATCATAACAACTAGAGATAAACAAGTACTAGCTAAAAGGGTGGTTGATAATGATATATATGAGGTTAAAAAATTAGACTTCAATGACTCTTTTCGCCTTTTCAATTTGAATGCATTTGAACAAAACCGACATCTTGAAGTAGAGTACGTTGAGCTGTCCACGAAGATGGTCGATTATGCTGATGGCAATCCACTAGTTCTTGAAGTTTTGGGTTGTCATCTTCATGGAAAAAACAAAAAGATATGGGAAAGTCAGTTCCAGATGCTTACAAAAGTACCAATTAAAAGGGTCAACGATGTTGTTAAATTGAGCTACAATGATCTTGATCGTCACGAGAAGAGGATACTTTTAGACATTGCATGTTTTTTAGATGGATTGCATCTCAAAGTTGACCTAATAAAATTGTTGGTGAAAGATCATGGTTATTCAGTAGATGTTGAGTTAGAAAGTCTGAAAAATAAAGCTCTTCTAACTATTTCTCAAGATAATGTCATATCCATGCATAGCATTATACAAGAAACAGCTTGGGAAATTGTTCGCGAAGAATCCATCAACGACCCTGGAAAACGAAGTCGTCTACTCGATCCTAATGATATTTATCGAGTACTGAAAAATAACAAGGGTAGTGAGGCTATTAGAAGCATAGCTACCGACTTGTCGATAATTAAGGAGTTGCAGTTGAATCCAAAGGTGTTTGCTAAAATGAATAATCTACGATACCTGGATATTTATAGTAAGGGGTACTCTTGTGATTTTGTCCAGACTCGAGAGGGCTTGTATCTTCCTCAAGGGCTTGAATCTTTGCCAAATGAACTCAGATACCTTCGTTGGGCACATTTCCCTTTGGAGTCCTTGCCATCCAATTTTTCTGGGGAAAATCTTGTAGTAATTGAATTGCAGTACAGCCGGGTGAGAGAACTTTGGCATGAAGATAAGGATCTTGTGAACTTAAAATATCTTAAACTTGATTCATCCTCGCACCTGGTGGAGCTTCCAGACTTGTCAAATGCTACAAACCTTGAAGCAATAGATCTTCGTCGCTGTAGAGGGTTGATCAGTGTACATCCATCTGTCTTTACTCTCAATAAGCTTGAGAAATTAGACCTAGGTGGATGTTTTTCTCTAACAAGCCTCAAAAGCAACATCCATTTAAGTTCCCTTCGCTATCTCTCCCTAGCTGGTTGCACTTCATTGAAGGAGTTCTCAGTTATCTCAAAGGAAATGGTAAAGATGAATTTAGAACTCACGCGTATAAAAAAACTACCATCATCAATTGGACTTCAAACCAAACTTGAAAAGTTGCTTCTTGCAAAAAGTTTCATTGAGAACTTGCCTGAAAGCTTCAAGCTTCTTACAAGGCTGAGACATCTTGGCTTACAAGATTGTAGGAAGCTTCGAAGTCTACCAGAGCTACCTTCATCATTGATAACTCTAGATGCCAGCGGTTGTGTATCATTGGAGAATGTAACTTTCCCTTCAACTTCTCTTCAAATGTTAAAGGAAAACAAGACAAGGGTTTCTTTCTGGAATTGTCTGAAACTGAATGAACATTCTCTCATAGAAATAGGGTTGAATGCACAAATTAACATGATGAAATTTGCACATCAGCATATATCCATATCTCGTCACCATTATGCTGCTCAAGGCACGTACGTGTACCCAGGAAGCAGTGTTCCAAAATGGTTGGTGTATAGGACAACACGTAATTACATGACAATTGATCTCTCTTTTGCTAACCATTCCTCTCCATTGGGCTTCATTTTTTGCTTCATTGTTCCACAAGTTCCATCACAGGGTTTCATTTTGAGATTTAATATCAGTGTTGATGAAGGTGAAGATATCCAACTGTACTTGGATAGGCCAGGTCATGAAATTAGATCAGATCATGTGTATTTAGTATATGACCGAGGCTTTTCTCGCTATCTCAATAGTCGAGTCAAAGATCAACCAAAGTTCAAAATTAAGGTTACAGCAGAATCACGCACACTAACATCAGAGTACGTGTCATTAATGATGTTGAAAGGGTTTGGGGTCAGTCCAATAAACACCTCACAATATCTCAATCTCATTCAACACATGGAAATGGCTGAAGGTCCACGTTTCCCAATCCCAATTTCATTATTGAGTATTGTTTACAGCCTTTTACTACCAATTTGCATATGGTTATTCCTAAAGTTTGTTCAATGA	3258	0.3751	MVPSGIFKRTFSNDVMCFIVCLLIVSLLHEAPTASSDNKDSVIFNPQIKYDVFVSFRGSDIRRDFLSHLTEAFTRKQIFAFVDTRVRRGDKISPSLVKAIETSLISLVIFSQNYASSPWCLDELVKIVQCRKKDGQILLPVFYKVDPTSVRHQRGTYANEFGKHEKKYNLSRVQNWRSALKESGNILGFHSSHFPSDAVLVEEIVKCLMKRLDHVQQVHSKGLVGIGKQISHVESLLQTGSKDVRAIGIWGMSGIGKTTIAEQVYSRLHSEYEGWYFKANVREEWGRHGYMYLKKELYSTLLKQQDLEIDTPHGLPPSVQRRLRRMKVLVVLDDVNDQEQLDILIGTLNWFGNGSRIIITTRDKQVLAKRVVDNDIYEVKKLDFNDSFRLFNLNAFEQNRHLEVEYVELSTKMVDYADGNPLVLEVLGCHLHGKNKKIWESQFQMLTKVPIKRVNDVVKLSYNDLDRHEKRILLDIACFLDGLHLKVDLIKLLVKDHGYSVDVELESLKNKALLTISQDNVISMHSIIQETAWEIVREESINDPGKRSRLLDPNDIYRVLKNNKGSEAIRSIATDLSIIKELQLNPKVFAKMNNLRYLDIYSKGYSCDFVQTREGLYLPQGLESLPNELRYLRWAHFPLESLPSNFSGENLVVIELQYSRVRELWHEDKDLVNLKYLKLDSSSHLVELPDLSNATNLEAIDLRRCRGLISVHPSVFTLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCTSLKEFSVISKEMVKMNLELTRIKKLPSSIGLQTKLEKLLLAKSFIENLPESFKLLTRLRHLGLQDCRKLRSLPELPSSLITLDASGCVSLENVTFPSTSLQMLKENKTRVSFWNCLKLNEHSLIEIGLNAQINMMKFAHQHISISRHHYAAQGTYVYPGSSVPKWLVYRTTRNYMTIDLSFANHSSPLGFIFCFIVPQVPSQGFILRFNISVDEGEDIQLYLDRPGHEIRSDHVYLVYDRGFSRYLNSRVKDQPKFKIKVTAESRTLTSEYVSLMMLKGFGVSPINTSQYLNLIQHMEMAEGPRFPIPISLLSIVYSLLLPICIWLFLKFVQ*	1086

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g0698	1085	PANTHER	DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)	37	1063	-	-
	Mal5g0698	1085	Gene3D	-	382	466	IPR042197	-
	Mal5g0698	1085	ProSiteProfiles	TIR domain profile.	48	212	IPR000157	GO:0007165
	Mal5g0698	1085	SUPERFAMILY	L domain-like	574	872	-	-
	Mal5g0698	1085	Pfam	NB-ARC domain	234	464	IPR002182	GO:0043531
	Mal5g0698	1085	Gene3D	Ribonuclease Inhibitor	766	878	IPR032675	-
	Mal5g0698	1085	Gene3D	Ribonuclease Inhibitor	552	765	IPR032675	-
	Mal5g0698	1085	Pfam	TIR domain	49	222	IPR000157	GO:0007165
	Mal5g0698	1085	SUPERFAMILY	Toll/Interleukin receptor TIR domain	45	189	IPR035897	-
	Mal5g0698	1085	SMART	till_3	49	186	IPR000157	GO:0007165
	Mal5g0698	1085	Gene3D	-	47	214	IPR035897	-
	Mal5g0698	1085	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	212	476	IPR027417	-
	Mal5g0698	1085	Gene3D	-	215	375	IPR027417	-
	Mal5g0698	1085	SUPERFAMILY	"Winged helix" DNA-binding domain	453	561	IPR036390	-
	Mal5g0698	1085	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	37	1063	IPR044974	GO:0006952
	Mal5g0698	1085	PRINTS	Disease resistance protein signature	246	261	-	-
	Mal5g0698	1085	PRINTS	Disease resistance protein signature	417	431	-	-
	Mal5g0698	1085	PRINTS	Disease resistance protein signature	739	755	-	-
	Mal5g0698	1085	PRINTS	Disease resistance protein signature	322	336	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g0698	Mal-Chr5	11674696	11690177	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g0698	44	855	WRKY Transcription Factor Family	AT4G12020	34.793	9.76e-116	392

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g0698	-		-	cam:101503346	1320.06