Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0692 ATGGCTTTTTCAGCTTATGAAGAAATGTATATTCTCCCTGGGATCATAATCACTGGAGCACTAGTAATTGCTTTTACATTTTTCATTCTCACAATGTTAGGATGGTGCAGGCTCACAAATCATGAATCAACAATTCCTACAACAGGCATATCATATGATGAAAAAATTTCTGCTTGCATAAGTTTAGAGTCGCATTCAATCACATTTCTGTACAATGAAGCTGATGCTGTGCAAGGCGTAAACCAGACTGAATGTGTTATCTGCTTAACAGTCTTTCAAGAAGACGAAAGTGTTCGGAAGCTTCACACGTGCAATCACATGTTTCATACATCTTGCATTGATAAGTGGCTTGCCTCTCATTTGGGATGTCCACTGTGTCGCTCTCAGATTGATCAAGTAACTTCGCCAAATGAATCATTGGCAAATGATCATATGAGTGTGAACATTGTCGACTCTGGGATTGAGAATATACTGGTTCATAGCAACCTACTAGTGAGAATGACATAG 507 0.3886 MAFSAYEEMYILPGIIITGALVIAFTFFILTMLGWCRLTNHESTIPTTGISYDEKISACISLESHSITFLYNEADAVQGVNQTECVICLTVFQEDESVRKLHTCNHMFHTSCIDKWLASHLGCPLCRSQIDQVTSPNESLANDHMSVNIVDSGIENILVHSNLLVRMT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0692 168 SUPERFAMILY RING/U-box 74 135 - -
Mal5g0692 168 SMART ring_2 85 126 IPR001841 -
Mal5g0692 168 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 52 144 - -
Mal5g0692 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 52 144 IPR044675 -
Mal5g0692 168 Pfam Ring finger domain 84 127 IPR001841 -
Mal5g0692 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 136 IPR013083 -
Mal5g0692 168 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0692 Mal-Chr5 11608660 11609166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0692 6 140 Rapid Response to Elicitors AT3G05200 29.932 4.03e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0692 - - gmx:102661636 199.904