Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0685 ATGTTGACTTGCATAGCTTGTTCAAAGAACCTCAATAATGGATCTCTTCATCAACAAGAAGAGGATGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATCAAAGCTCTTACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCCGGGGCCTATAAGAATTGCAAGCCATGTTCAGGATCTTCAAATGGTAACAAGAACAAAAAATATGCTGATTCTGATATGGGATCAGATTCAGCAAGGTTCAACTGGGCGTACCAAAGAACCGGGAGCGCAAGTTCAACACCAAGAATGTGGGGGAAGGAAATGGAAGCGAGACTCAAAGGGATTTCGAGTGGAGAAGGAACGCCGACATCGGTGAGCGGACGTACCGAGTCGGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAGCCAGGTGTGCTTATTACTTTTGTTTCATTGCCTGAAGGTGGGAATGATTTGAAGAGGATACGGTTCAGTCGCGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCAGAGAACTATGACAAGGTTATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGTTCAAAGGTTGAATCTGCGAGGGACAGCCCCGTCACACCTCCTCTAAGCAAAGAGCGCCTGCCCCGTCATATTCACCACCCAATGACAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCATATGCAACCTCAGCCTGGCTATGAAACAAGTGGTCTGGCATCAAAATCTAATCTTTTGAACGTTGGTGTGCCAAAGACCGACAGATCATCCATTGATGCTTCTGTAAGGACAAGTTCATCGGAAGAGGAAGATCACTCTGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTACCTGGTGGAACCAGGGAACTTAGGCGCGTCCGTTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAAAACCGTGCCAGGATACAAGAGCAATATTTGTGA 1110 0.464 MLTCIACSKNLNNGSLHQQEEDEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNWAYQRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPEGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKVESARDSPVTPPLSKERLPRHIHHPMTMGYSSSDSLDHHHMQPQPGYETSGLASKSNLLNVGVPKTDRSSIDASVRTSSSEEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0685 369 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Mal5g0685 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Mal5g0685 369 MobiDBLite consensus disorder prediction 200 305 - -
Mal5g0685 369 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Mal5g0685 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Mal5g0685 369 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Mal5g0685 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
Mal5g0685 369 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 369 - -
Mal5g0685 369 MobiDBLite consensus disorder prediction 262 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0685 Mal-Chr5 11438461 11441453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0685 1 369 Major Intrinsic Protein MIP AT1G31880 47.804 1.52e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0685 - - gmx:100805480 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0685 5 11438461 11441453 Mal5g0685 5 11438461 11441453 ECH