Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0676 ATGGATTTGAGTGTGGCTGAGGAAGAGGTAGAGTCAGAGGAAGAGATTCATGTGCCAGCTGAAATTGATTGGCAAATGCTTGATAAATCGAAGTTTTTCTTCCTCGGTGCTGCTTTGTTTTCTGGTGTTTCAGCAACATTGTATCCTGTTGTTGTGTTGAAAACTAGGCAGCAAGTTGCTCAGTCACAAGTTTCTTGTATTAAGACTGCGTTTTCGTTGATTAAGGGGGAGGGGTTTAGAGCGTTGTATCGTGGGTTTGGTACTTCGTTGATGGGTACAATCCCCGCTAGGGCTTTGTATATGGCGGCGCTTGAGGTTACTAAGAGTAATGTAGGGACTGCTACTGTTGGTTTTGGTCTTGCTGAACCGACTGCTGCTGCAATTGCTAATGCGGTTGCTGGTTTGACTGCGGCTTTGGCAGCTCAGCTTGTGTGGACGCCGGTTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTGTAATTCAAGTGATCCTAAGGGTTCATCTGTTAGATATGTTAATGGAATTGATGCTTTTAGGAAAATTGTGAGGACGGATGGTCCTAGGGGTTTGTATAGAGGTTTTGGGATATCGGTTTTGACATATGCGCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGATGTTACTTGAGTAACAAGAAAGGTGGGGAGGGAAGTGACAGCAATGGTGGGGCTAATGTGTTGAGGCCGGATACAAAAACTGTTATGGCTGTTCAGGGAGTCAGTGCTGCAATGGCAGGAGGCATGTCTGCTTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTCCAGGTCTTGGACGGCGATGAGAATGGCCGTCGTGGACCAACCGTGATGCAGACAGTTAGAAGTTTGGTTAAGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCGTTCTCAGCAACAACAATGATCACAACCTATGAGCTTCTAAAACGGCTTTCCGCAAAGCATCAAGAGGTTTTGACATGA 1056 0.4593 MDLSVAEEEVESEEEIHVPAEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGFGLAEPTAAAIANAVAGLTAALAAQLVWTPVDVVSQRLMVQGGCNSSDPKGSSVRYVNGIDAFRKIVRTDGPRGLYRGFGISVLTYAPSNAVWWASYSVAQRMVWGGVGCYLSNKKGGEGSDSNGGANVLRPDTKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSFSATTMITTYELLKRLSAKHQEVLT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0676 351 Pfam Mitochondrial carrier protein 39 110 IPR018108 -
Mal5g0676 351 Pfam Mitochondrial carrier protein 127 221 IPR018108 -
Mal5g0676 351 Pfam Mitochondrial carrier protein 257 346 IPR018108 -
Mal5g0676 351 Gene3D Mitochondrial carrier domain 32 349 IPR023395 -
Mal5g0676 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Mal5g0676 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Mal5g0676 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 348 - -
Mal5g0676 351 SUPERFAMILY Mitochondrial carrier 25 339 IPR023395 -
Mal5g0676 351 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Mal5g0676 351 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Mal5g0676 351 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085
Mal5g0676 351 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Mal5g0676 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 3 348 - -
Mal5g0676 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 342 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0676 Mal-Chr5 11262895 11263950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0676 1 348 Chloroplast and Mitochondria Gene Families AT1G72820 72.934 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0676 K15121 - gmx:100789089 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0676 5 11262895 11263950 Mal5g0676 5 11262895 11263950 ECH