Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0652 ATGCAAAGAATTAAGGATGAATTAGGAGTTGCCACCACCGTCAAAACCACCGTCATTGCCATTAACGGCGGTCGGAATAGCCAATTCGCGGTGAAATGGACCGTAGATCACCTTCTAAAGAAGAACTCCATTTGCATTCTCATTCATGTTCGTACCAAGCCCATTAATTCCAATGATCATGTTAATCATGTTCCTAAACATGGACGTCCACCAACTCAAGAAGAATTGCACCAATTCTTTCTTCCCTTTCGTGGATTTTGTGCTAGAAAAGGGATTGAGGCAAAGGAATTGGTTTTGCATGACATTGATGTATCTAGTGCACTTACTAATTATGTCGTTGAAAATTTTATCAACCATGTTGTTGTTGGTGCTTCTGGTTCCCCTTGGAGTGCTCTTATAAGGAGATTTAAAGAAGTGGATGTGGCATCTATCTTAGCTAAGTCATTGCCAAAGTCATGCACATTGTATGTTATATCAAAAGGAAAAGTACAAAATATTCGACCTACAAGACCTCCTATTCCTCCTCATGATGAAGCATATAAAACTAGATCTATAAGAGACATAGTTACACTCTTGCAAGAGGCTCAACTGGTTCAGCCAAATAAGTTTTTTGCACATACCCCTGATTGTGAAGATTTAAACAGGAAACCACTCAAAGATGCAAACAAAGTTTGGGAATCATTACGTGATATGAAAGATGTTATACTATTAACACCATATAAATCCAATATTCTTGAAGATAACAATTCACCCAAAGGTCCAAGATTATCAGCAGGAATCCCCTCACCACAAACTTCATCAAATAGAAGTTCTCCTGCCAATAGTAATGACAGTTCAGGGAAACATGGTCATCATTTGACAAACATGTTGTATGGAAATCATGAAGTTATAATTCCAGATAATACTAAGGGCTTATTTTCTTCAAAACCACCATTACAGATAAGCATTGAGACAGAAATAAAGAAATTAAAACTAGAATTGAAGAAAACAACAGAGCAGTATGGTATGGCATGCAGAGAAGCTGTTTTAGCAAAACTCAAGGCAACTGAAATTGAACAATTAAGGCAAGAAAAAGAACAAAATGTGGAAAAAGCAAGGCTTGCTGAAGAGGCTGCACTAGCTTTAGCTGAAGTAGAGAGACAAAAAGCAAAAGCTGCTTTGGAATCGGCCAAAATGTCAAGGCGTCTTGCAGAGATAGAAACTCAAAAGAGAAAGCTAGCTGAATTAAAAGCTAAATACGAGGAAGAAGATGGGAGAAGGACATTACAAGAAGTTGTGTATAATAACATTCCACATAGAAGATACAATATTAAAGAAATTCAAGCTGCGACTAATCACTTTGACAATGCACTCAAAATTGGTGAAGGGGGGTATGGACCTGTTTTTAAAGGTGTGATTGATCACATTATTGTTGCTATAAAGGTTCTTAAACCTGATTTAGCTCATGGAGAGAGGCAATTTCAACAAGAGGTTCTTATTTTGAGCAATATAAGACATCCAAACATGGTGCTCCTTCTAGGTGCATGTCCAGAGTTTGGATGCCTTGTGTATGAATACATGGAAAACGGAAGTCTAGAAGACCGTTTATTCCGAAAAGATGACAGTCCTCCAATTCCATGGAAAAATCGTTTTAAAATAGCATCTGAGATTGCCACCGGCCTTCTTTTCCTTCATCAAACAAAGCCAGAGCCAATAGTTCATCGCGATATGAAACCAGGAAACATTCTCTTAGACAAAAACTATGTGAGCAAGATCAGTGATGTTGGTTTGGCGCGACTCGTTCCGGCTTCGGTGGCTAACAAAACCACTCAATATCGCATGACAGGTGCGGCTGGAACATTTTGTTACATTGATCCTGAGTATCAACAAACTGGGTTATTGGGTGTGAAATCAGATATATACTCATTTGGTATGGTTTTGCTACAAATTATCACTGCAAAGCCTCCAATGGGGTTGTCTCATTTGGTTGAGAAAGCTATACAGAAAGGGAACTTCATAGACGTGCTTGATCCAAATGTACCAAATTGTCCTGTTGAAGAGGCTTTGGCATGTGCTAAGCTGGCTTTAAAGTGTATTGAGTTCAGAAAACGTGATAGACCTGATCTTGGTACTGTTATTTTGCCAGAGCTGAATCGAATATCACATATTTGGAACTCTTATGAGGAATGA 2169 0.3845 MQRIKDELGVATTVKTTVIAINGGRNSQFAVKWTVDHLLKKNSICILIHVRTKPINSNDHVNHVPKHGRPPTQEELHQFFLPFRGFCARKGIEAKELVLHDIDVSSALTNYVVENFINHVVVGASGSPWSALIRRFKEVDVASILAKSLPKSCTLYVISKGKVQNIRPTRPPIPPHDEAYKTRSIRDIVTLLQEAQLVQPNKFFAHTPDCEDLNRKPLKDANKVWESLRDMKDVILLTPYKSNILEDNNSPKGPRLSAGIPSPQTSSNRSSPANSNDSSGKHGHHLTNMLYGNHEVIIPDNTKGLFSSKPPLQISIETEIKKLKLELKKTTEQYGMACREAVLAKLKATEIEQLRQEKEQNVEKARLAEEAALALAEVERQKAKAALESAKMSRRLAEIETQKRKLAELKAKYEEEDGRRTLQEVVYNNIPHRRYNIKEIQAATNHFDNALKIGEGGYGPVFKGVIDHIIVAIKVLKPDLAHGERQFQQEVLILSNIRHPNMVLLLGACPEFGCLVYEYMENGSLEDRLFRKDDSPPIPWKNRFKIASEIATGLLFLHQTKPEPIVHRDMKPGNILLDKNYVSKISDVGLARLVPASVANKTTQYRMTGAAGTFCYIDPEYQQTGLLGVKSDIYSFGMVLLQIITAKPPMGLSHLVEKAIQKGNFIDVLDPNVPNCPVEEALACAKLALKCIEFRKRDRPDLGTVILPELNRISHIWNSYEE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0652 722 Gene3D HUPs 11 160 IPR014729 -
Mal5g0652 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Mal5g0652 722 PANTHER OS02G0152300 PROTEIN 16 717 - -
Mal5g0652 722 CDD STK_N 16 161 - -
Mal5g0652 722 Coils Coil 313 333 - -
Mal5g0652 722 Gene3D Transferase(Phosphotransferase) domain 1 520 719 - -
Mal5g0652 722 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 16 717 - -
Mal5g0652 722 MobiDBLite consensus disorder prediction 246 286 - -
Mal5g0652 722 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 128 - -
Mal5g0652 722 Coils Coil 348 419 - -
Mal5g0652 722 Pfam Protein tyrosine and serine/threonine kinase 452 705 IPR001245 GO:0004672|GO:0006468
Mal5g0652 722 CDD STKc_IRAK 453 713 - -
Mal5g0652 722 SUPERFAMILY Protein kinase-like (PK-like) 422 705 IPR011009 -
Mal5g0652 722 Gene3D Phosphorylase Kinase; domain 1 426 519 - -
Mal5g0652 722 ProSiteProfiles Protein kinase domain profile. 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0652 722 SMART serkin_6 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0652 722 MobiDBLite consensus disorder prediction 259 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0652 Mal-Chr5 10562374 10569648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0652 12 716 Receptor kinase-like Gene Family AT1G78940 44.293 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal5g0652 PK_Tyr_Ser-Thr 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0652 - - gmx:100799611 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0652 5 10562374 10569648 Mal5g0652 5 10562374 10569648 ECH
Mal5g0652 5 10562374 10569648 Mal4g0417 4 3614962 3618732 PCT