LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g0634	ATGAGGGTACTTCCACATTCTAAGAACAATAACACATACGTAGCTATGGCTTCTTCTTCTTTCTCTCATGGTGCTACTGTGCCTTTGAAAAAATATGATGTTTTCATCAGCTTTAGAGGCGACGACACTCGCGCTGGTTTCACAAGCCGTCTTTATGCTGCTTTGTGCCGAAGCAAATTTCATACCTACATAGACTACAGGATCGAGAAAGGAGATCAAGTTTGGACAGAACTTGTGAAAGCAATCAAACAATCCACTATGTTTCTTGTGGTGTTCTCGGAGAACTATGCGAATTCAACATGGTGTTTGAACGAACTCGTTGAAATAATGGAGTGTAGTAACAAAAATGAAGAAGACAAGGTTGTTGTTATTCCTGTGTTTTACCATGTTGACCCTTCACACGTGCGGAAGCAGACTGGGAGTTACGGTACTGCGTTGGCAAAACACAAGAAGCAAGGCAACAATGATGATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGCTGCTAATTTGTCTGGTTTTCATTCCACCACATACAGGACTGAATATGAATTGATTGAAGATATTACCAGAGTTGTATTAGGAAAATTAAATCAACACTACACAAATGATCTTACATGTAATTTCATACTTGATGAAAACTATTGGAGCATTCAATCTTTGATAAAAATTGATCCAACTGAAGTTCAAACCATTGGAGTTTGGGGTATGGGAGGCACCGGAAAGACAACCCTTGCTGCTGCTATGTTTCAAAGGGTCTCTTTTAAATATGAAGGCAGCTGCTTCTTAGAAAATGTGACAGAAGTATCAAAAAGACATGGAATTAATTACACATGCAACAAACTTCTTTCTAAGTTACTAAGGGAAGATCTTGATATTGACACTCCCAAAGTAATACCATCCATGATCAGGAGAAGACTCAAAAGCATGAAATCTTTCATTGTACTAGATGATGTACAAAATTCAGAACTTTTGCAAAACTTAATTGGAGTGGGACATGGTTGGCTAGGATTTGGTAGCACAGTCATTGTGACGACTAGGGATAAGCATGTGCTGATAAGTGGAGGAATTGACAAAATTTATGAAGTTAAGAAGATGAACTCCCGAAATTCCCTCCAGCTTTTCAGCTTGAATGCTTTTGATGAAGTCTCACCTAAGGATGGATATGCGGAGCTATCAAAAAGAGCAATTGATTATGCCAATGGAAACCCTTTAGCTTTGAAAGTATTGGGATCATTACTTCGTTGTAAAAGTGAAATTGAATGGGATTGTGCACTAGCTAAACTGAAAGAAATTCCAAACACAGAAATTGATTTTATATTTAGATTGAGTTATAATGATTTGGATGATAAAGAGAAAAATATATTTTTGGACATTGCGTGCTTTTTCAAAGGGCATGAAAGGAATAAGATAACAAAAATATTAAATGAGTGTGGATTCTTTGCTGATATAGGGATACGTCATCTTTTAGATAAGGCTCTTATAAGAGCCGACTTTAAAAATTGTATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCACTTAAGAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTGTAATGTATTGAAAAATAATAGAGGATCTGAGAATGTTGAAGCAATATTTTTAGATGCTACTGAATTGGCACATATAAATTTAAGACCTGAAGCATTTGAAAAGATGGTAAATCTAAGGTTACTTGCTTTTCAAGACCACAAGGGAATTAAATCAGTAAGCCTTCCACATGGTCTTGACATATTGCCGGAAAATTTGAGATATTTTTCATGGGATGGCTATCCATTGAAATCTCTGCCTTCAACATTTTGTCCTGAAATGCTTGTAGAGCTTTCCTTGAAAGGAAGCCATGTGGAAAAACTTTGGAATGAAGTACTGGATTTGCCAAATTTAGAGATACTTGACCTTAGTGACTCCAAAAAGCTGATAGAGTGTCCAAATGTGTTTGGTTCCCCGAATCTAAAACATGTAATACTTCGTTATTGTGAAAGCTTGCCTGAAGTTGATTCATCAATTTTCCATCTCCAAAAGCTTGAAGTTTTAAATGTGTTTGAATGCAAGTCACTTAAGAGCCTTTCCAGTAACACTTGTTCACCAGCCCTCCGTAAATTGGAAGCTAGGGATTGCGTCAATCTCAAAGAGTTCTCAGTCACATTTTCTTCGGTTGATGGTTTGGATTTGTGTTTATCAGAGTGGGATAGGAATGAACTTCCATCATCAATATTGCATAAAAAAAATCTTAAACGGTTTGTCTTTCCTCTCAGTGATTGTCTTGTTGATCTTCCTGAAAACTTTGCCGATCGTATTCAGCTTTCGAGTCCACTGAATCGTGAACATGACCCTTTCATCACCTTAGATAATATTCTTCATAGTCCTGCCTTCCTGAGTGTAAAAGACTTAACCTTTTTTTATATTCCTATCTTGTCTGAATTCCCAGAAAGTATCTCCTTACTATCTTCATTGGAGACTTTGACACTGGATGGTATGGCCATTAGGAGCTTGCCTGAAACCATTAAGTATCTTCCCCGCCTCGAACGTGTTGATATTTACGATTGTCAAATGCTTCAATCTATTCCGGCGCTTTCACAGTTCATTCCAGTTTTGGTTGTCTTGGATTGTGAATCTCTTGAGGAAGTGTTGAGTTCAACGAGTGAACCATATGACGAACCTAATCCTTGTTTCATTTTTCTCCTTAACTGCAAAAATTTGGAACCACGTTCATACCAAACACTTTTGAAAGATGCTATGGATAGGATTGATACTGGACCATCTTTATATGACGAAGATGAAATTATTTGGTACTTTTTACCTGCTATGCCTGGCATGGAAAATTGGTTCCATTACTCTTCTACACAAGTTTCTGTGACTCTTGAGCTTCCTTCTAATTTGCTGGGTTTTGCCTACTACTTGGTTCTTTCTCAAGGAAATATGGGATATGATGTAGATTTTGGATGTGAGTGCTACTTCGACGATAGTTCAGGTGAAAGAATCTATATAACAAGTTTCACAAGAACCAACTTCCTCGGTTGGTTATCACGTTTCAATCCGTCAATCCACATGATGTCAGATCATTTGGTTTTTTGGTATGATCAAGAAAGTTGCAAGAAGATAATGGAAGCAGTTGAAGGAATAAAATCCATTAATGATGTGACCAACACTAGTTACAATCCAAAGCTTACATTTAATTTCTTTATTGAGGAAGATCTATATGATGAAGTAGCGATAAAAGAGTGTGGGTTTCGCTGGATATATAAGGAAGAAACTATTCCTTCAACAATTTCTGAATCCCATGATCAAGAAGAAATAGTTCCTCCAACAAATTTTGAATCAGATGATCTAGAAGAAACAATTCCTCCAAGAAACAAATTAAACCTAGACATCTTTGGAACTCCTCCGTTAAATCTAGAATTAGATGAAACATATGATTTGAGGTGTTCACTTGAAGAGCTCCTGCATATTGGATTTGGAGGAGAGCACATGAACACTTTGTTTGGTTCAACAGAAGGAAAAAGCAACAGCTGA	3579	0.3691	MRVLPHSKNNNTYVAMASSSFSHGATVPLKKYDVFISFRGDDTRAGFTSRLYAALCRSKFHTYIDYRIEKGDQVWTELVKAIKQSTMFLVVFSENYANSTWCLNELVEIMECSNKNEEDKVVVIPVFYHVDPSHVRKQTGSYGTALAKHKKQGNNDDKMMQNWKNALFQAANLSGFHSTTYRTEYELIEDITRVVLGKLNQHYTNDLTCNFILDENYWSIQSLIKIDPTEVQTIGVWGMGGTGKTTLAAAMFQRVSFKYEGSCFLENVTEVSKRHGINYTCNKLLSKLLREDLDIDTPKVIPSMIRRRLKSMKSFIVLDDVQNSELLQNLIGVGHGWLGFGSTVIVTTRDKHVLISGGIDKIYEVKKMNSRNSLQLFSLNAFDEVSPKDGYAELSKRAIDYANGNPLALKVLGSLLRCKSEIEWDCALAKLKEIPNTEIDFIFRLSYNDLDDKEKNIFLDIACFFKGHERNKITKILNECGFFADIGIRHLLDKALIRADFKNCIQMHDLIQEMGKQIVREESLKNPGQRSRLCDPKEVCNVLKNNRGSENVEAIFLDATELAHINLRPEAFEKMVNLRLLAFQDHKGIKSVSLPHGLDILPENLRYFSWDGYPLKSLPSTFCPEMLVELSLKGSHVEKLWNEVLDLPNLEILDLSDSKKLIECPNVFGSPNLKHVILRYCESLPEVDSSIFHLQKLEVLNVFECKSLKSLSSNTCSPALRKLEARDCVNLKEFSVTFSSVDGLDLCLSEWDRNELPSSILHKKNLKRFVFPLSDCLVDLPENFADRIQLSSPLNREHDPFITLDNILHSPAFLSVKDLTFFYIPILSEFPESISLLSSLETLTLDGMAIRSLPETIKYLPRLERVDIYDCQMLQSIPALSQFIPVLVVLDCESLEEVLSSTSEPYDEPNPCFIFLLNCKNLEPRSYQTLLKDAMDRIDTGPSLYDEDEIIWYFLPAMPGMENWFHYSSTQVSVTLELPSNLLGFAYYLVLSQGNMGYDVDFGCECYFDDSSGERIYITSFTRTNFLGWLSRFNPSIHMMSDHLVFWYDQESCKKIMEAVEGIKSINDVTNTSYNPKLTFNFFIEEDLYDEVAIKECGFRWIYKEETIPSTISESHDQEEIVPPTNFESDDLEETIPPRNKLNLDIFGTPPLNLELDETYDLRCSLEELLHIGFGGEHMNTLFGSTEGKSNS*	1193

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g0634	1192	Gene3D	-	205	357	IPR027417	-
	Mal5g0634	1192	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	24	1034	-	-
	Mal5g0634	1192	Gene3D	-	29	204	IPR035897	-
	Mal5g0634	1192	PRINTS	Disease resistance protein signature	645	661	-	-
	Mal5g0634	1192	PRINTS	Disease resistance protein signature	402	416	-	-
	Mal5g0634	1192	PRINTS	Disease resistance protein signature	233	248	-	-
	Mal5g0634	1192	PRINTS	Disease resistance protein signature	308	322	-	-
	Mal5g0634	1192	SUPERFAMILY	Toll/Interleukin receptor TIR domain	30	176	IPR035897	-
	Mal5g0634	1192	MobiDBLite	consensus disorder prediction	1113	1134	-	-
	Mal5g0634	1192	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	24	1034	IPR044974	GO:0006952
	Mal5g0634	1192	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	207	461	IPR027417	-
	Mal5g0634	1192	Pfam	NB-ARC domain	222	443	IPR002182	GO:0043531
	Mal5g0634	1192	Gene3D	-	367	451	IPR042197	-
	Mal5g0634	1192	Gene3D	Ribonuclease Inhibitor	801	901	IPR032675	-
	Mal5g0634	1192	SMART	till_3	31	173	IPR000157	GO:0007165
	Mal5g0634	1192	Gene3D	Ribonuclease Inhibitor	512	750	IPR032675	-
	Mal5g0634	1192	Pfam	TIR domain	31	205	IPR000157	GO:0007165
	Mal5g0634	1192	SUPERFAMILY	L domain-like	506	926	-	-
	Mal5g0634	1192	ProSiteProfiles	TIR domain profile.	30	199	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g0634	Mal-Chr5	10159071	10164279	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g0634	30	870	WRKY Transcription Factor Family	AT4G12020	31.184	3.20e-92	325

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g0634	-		-	mtr:MTR_8g018480	2088.54