Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0619 ATGTCTACCTCTACCCAAAAAAAATACGATGTGTTCATTAGCTTTAGGGGTGATGACACAAGGAGAAATTTCACAAGCCAACTTCATCATGCTCTTACAAAGGAAAACATCAACACTTACATTGATATATATATTAAAATTGGAGATGAGGTTGGACCTATGATTATTCAAGCAATCCATGATTCAAGTATATCTATAGTTGTTTTCTCAAGAAACTATGCTACCTCAAAGTGGTGTATGGAGGAACTTCTCCACATACTTGAACGTAGAAAAAATCATGGACAAGTAGTTATACCTGTGTTCTATGGGATTGATCCATTAAATGTATTTCATGGGACAGGGAGTTATGCAAAAGCATTTGCAAGATATGAGAGAGAGCTCATGAACAATCAATGTGATGACATCACAAATCCTGAAAAACTGTCCATGTGGCGAGCTGCTCTTGAGGAGGTCGCCGTTATATCTGGACAGGACTCTCGTGATTACAGTGATGATTCTCAATTCATTCAAAGTATTGTGAAACATGTTTCACAAACGCTATCCTGGCTGTATCCCAATGAACTTGAAGACCTCATTCAAATTGATGAAAAATGTGAAGAAATTGAAAATCATCTTGAAAAGTTACCAAGAATTGGAATTTGGGGCATGGATGGATTAGGAAAGACAACCATAGCTAAAAAAATGTTTGCCAAGCACTTATCACATTTTGACAGTGCATGCTTCTTAGAAAGCATAAGCCAAAGGTCAGAAAATTTTGGACTCCCATACCTACGTGATAAGCTTCATAGTGATCTACTTAAGAAAGAAATTTCTTCATCTGATTTTCATGGACTTGGTGGTAAAAGAGTTTTCATTGTACTTGATGATGTGGAAAATGGTATGCAAATAGATTATTTGTGTGGAGATCTCAATGATCTTGCACCAAATAGTAGAATTGTTATCACCACAAGAAATAGGGATACACTTAATGGAAGAGTTGATGAGATTCATGAGGTCAAAAAATGGGAGTTTAAAGAATCTCTAGAACTTTTTAGCTTGGAAGCCTTCAAACAAAGTCATCCTAAAGAAAATTATGAGCGTCTCTCGGAAAGGGCAGTGGCATGTTTAGGAGGTGTTCCATTAGCTTTAAAAGTTTTTGGTTCACATTTTCGGTCAAGAAATCTCGAGTTTTGGGAATTTGAATTGAACTATTTGGAGAATAAAGGGGAATCGTTGTGCGAAATACAAGATGTGTTAAGAGTGAGCTATAATGGATTAGAAGTGCAAGAGAAGGAAATGTTTCTCGACATTGCATTCTTTTTCAAAGATGAAAATAAAGATTTTGCTATAAGGATACTAGATGCTTGTGGTTTCAATGCTACAAGTGGAATAGATCTCCTTAAAGATAAAGCTCTTATCACCATTTCAAGTGACAACAAAATAAAAATGCATGACTTGCACCAAAATATGGCTTTGGATATAGTTCAATACAATAAAGATCATATAAGAAAAGACCCAAGAAAATGTAGCCGATTGATCGATGCTGAAGAAGTTTATAGTTTCCTTAAGAGTAACAAGGAAACTCAAAATAAAGTTGAAGGTATATCATTTGATTTGACTCAAAAAGAAGACTTGCATGTCCAAGTTGACACATTCAACTTGATGACTGAACTAAGATTTCTTAGATTATATGTCCCATTGGGTAAGAAGAAATCTTCTACCTTGTGTCATCTTGATCAAGGTATTATGCCATTTCCTGATAAGTTGAGATACCTTGAGTGGTATGGGTACCCTTTGAAGTCTCTTCCACAACCTTTTTGTGTTGAGCTTCTTGTTGAGATTCGCTTGCCGCATAGCCATATAGAACATCTTTGGGATGGTATTCAGGAGCTTGTGAATTTAGAGGGGATTGACCTAAGTGAATGCAAACAATTGGTGAAGCTCCCTGATTTATCTAAGGCAACAAGACTTAAATGGTTGTTTCTATCTGGTTGTGAAAGTTTATGTGAAATTCAATCATCTATTTTTCGTAACGATACACTTGTTACTTTGCTACTAGATAGGTGCAAGAAATTGGAAAGTCTTGTAAGTGAAAACCATTTAACATCTCTACAAAATATTGATGTTAGCGGTTGCTCAAGTCTCATAGAATTTTCACTATCCTCAACTTCAATTGAAGGGTTGGATTTAAGCAAAACAAATGTCAAAACATTGCACCCATCAATTGGTCATATGAGCAATCTTTTGTGGCTCAACCTACAAGGTTTAAGGCTACAAAATGTGCCAAAAGAATTGTCACACTTGAGCTCACTTACTCAACTTTGGATTTCAAATTGCAGTGTGGTAACAAAATCAATCTTAGAAGGGGTATTTGAATTTCATAATGGTTTGGAATCATTAAAAACATTGTTCTTGAAAGATTGTTGCAACTTGTTTGAGCTTCCTACCAACATCGATTCATTATCATCGCTATATGAATTACGCCTAGATGGAAGCAATGTAACGATGTTGCCTACAAACATCAAGAATCTTGTAAACCTAGAAATTCTATCCTTAAACAACTGTAAGGAGCTTAATTGTTTACCAGAGCTTCCTAAATGCATCAAAGAGCTTTATGCCGAAAACTGCACCTCATTGGTTAAAGTATCAACTTTGAAGACTATGTCAAGACACAAGAATGGAGAGGAGAAATATATTTCATTCAAGAACGGAAAGAAGATGGAATCAGATGAATTTTCACTCAACCGCGTCACTGAAGACACAATATTAACAATGAAAGGAAGAAGAATTCCAGAGCAATTCAAATACAGAACAACTAATTCAAAAATAACTATTGAGTTTTCGGACTTCTGTGACTCGTTGGGATTCGTTTTCTCGGTGGTTATTTCTCCATCGAATAGAATGAATAATGAGCATGGTAATGGTGCTAAAATTCAGTGCCAATGCTATAAAGAAGATGGAACTAAGGTGGGATTTTCTTCGGAGTGGCATAGTGAACCTGTTACAGATTTGAATATGGATCATGTTTTTATGTGGTACGATCCATATGGTTTCGGAGTCCTACGGTACATTAGTGAAGGAAATATTTCTTTTGAATTCAGTGTTACAAGTGATACTGGGGAACATGATTACTTTGATCTCAATGTGAAAGAGTGTGGAATATGTCCAGTTTATACATCAGAATATTTGAGTCTTTTAGACATGTTAAATTTGAATGAGATTGTTGAATCATGTATACGTAGGAATATGCATTGTGATGAAATAGACCATGAGATAAAAGACAATGACATTGAATCACATGAAGGATAG 3288 0.3552 MSTSTQKKYDVFISFRGDDTRRNFTSQLHHALTKENINTYIDIYIKIGDEVGPMIIQAIHDSSISIVVFSRNYATSKWCMEELLHILERRKNHGQVVIPVFYGIDPLNVFHGTGSYAKAFARYERELMNNQCDDITNPEKLSMWRAALEEVAVISGQDSRDYSDDSQFIQSIVKHVSQTLSWLYPNELEDLIQIDEKCEEIENHLEKLPRIGIWGMDGLGKTTIAKKMFAKHLSHFDSACFLESISQRSENFGLPYLRDKLHSDLLKKEISSSDFHGLGGKRVFIVLDDVENGMQIDYLCGDLNDLAPNSRIVITTRNRDTLNGRVDEIHEVKKWEFKESLELFSLEAFKQSHPKENYERLSERAVACLGGVPLALKVFGSHFRSRNLEFWEFELNYLENKGESLCEIQDVLRVSYNGLEVQEKEMFLDIAFFFKDENKDFAIRILDACGFNATSGIDLLKDKALITISSDNKIKMHDLHQNMALDIVQYNKDHIRKDPRKCSRLIDAEEVYSFLKSNKETQNKVEGISFDLTQKEDLHVQVDTFNLMTELRFLRLYVPLGKKKSSTLCHLDQGIMPFPDKLRYLEWYGYPLKSLPQPFCVELLVEIRLPHSHIEHLWDGIQELVNLEGIDLSECKQLVKLPDLSKATRLKWLFLSGCESLCEIQSSIFRNDTLVTLLLDRCKKLESLVSENHLTSLQNIDVSGCSSLIEFSLSSTSIEGLDLSKTNVKTLHPSIGHMSNLLWLNLQGLRLQNVPKELSHLSSLTQLWISNCSVVTKSILEGVFEFHNGLESLKTLFLKDCCNLFELPTNIDSLSSLYELRLDGSNVTMLPTNIKNLVNLEILSLNNCKELNCLPELPKCIKELYAENCTSLVKVSTLKTMSRHKNGEEKYISFKNGKKMESDEFSLNRVTEDTILTMKGRRIPEQFKYRTTNSKITIEFSDFCDSLGFVFSVVISPSNRMNNEHGNGAKIQCQCYKEDGTKVGFSSEWHSEPVTDLNMDHVFMWYDPYGFGVLRYISEGNISFEFSVTSDTGEHDYFDLNVKECGICPVYTSEYLSLLDMLNLNEIVESCIRRNMHCDEIDHEIKDNDIESHEG* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0619 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 982 1055 IPR044974 GO:0006952
Mal5g0619 1095 PANTHER NB-ARC DOMAIN PROTEIN 982 1055 - -
Mal5g0619 1095 ProSiteProfiles TIR domain profile. 7 180 IPR000157 GO:0007165
Mal5g0619 1095 Gene3D Ribonuclease Inhibitor 716 896 IPR032675 -
Mal5g0619 1095 Gene3D Ribonuclease Inhibitor 522 715 IPR032675 -
Mal5g0619 1095 Gene3D - 2 180 IPR035897 -
Mal5g0619 1095 Pfam NB-ARC domain 198 402 IPR002182 GO:0043531
Mal5g0619 1095 Pfam C-JID domain 919 1054 IPR045344 -
Mal5g0619 1095 Pfam Leucine Rich Repeat 604 622 IPR011713 -
Mal5g0619 1095 SMART till_3 8 154 IPR000157 GO:0007165
Mal5g0619 1095 Gene3D - 336 420 IPR042197 -
Mal5g0619 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 928 IPR044974 GO:0006952
Mal5g0619 1095 PANTHER NB-ARC DOMAIN PROTEIN 7 928 - -
Mal5g0619 1095 SUPERFAMILY L domain-like 475 872 - -
Mal5g0619 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 430 IPR027417 -
Mal5g0619 1095 PRINTS Disease resistance protein signature 277 291 - -
Mal5g0619 1095 PRINTS Disease resistance protein signature 210 225 - -
Mal5g0619 1095 PRINTS Disease resistance protein signature 369 383 - -
Mal5g0619 1095 PRINTS Disease resistance protein signature 692 708 - -
Mal5g0619 1095 Pfam TIR domain 8 186 IPR000157 GO:0007165
Mal5g0619 1095 Gene3D - 181 330 IPR027417 -
Mal5g0619 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0619 Mal-Chr5 9852695 9859750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0619 4 820 WRKY Transcription Factor Family AT4G12020 32.113 7.31e-80 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0619 - - cam:101489032 1187.94