Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0616 ATGTGTATCTCTCACAAAAAGAACGATGTGTTCATTAGCTTTAGGGGTGAGGATAGCCGTGAAACCTTCATAATCCAGCTATATCATGCTCTCAAGAAGCAAAACATCGAAACATACATTGACATCAAACTTGAAAGAGGTGACGATGTTTGGTCTGCACTTGAACAAGCAATCCAGGACTCACGTATTTCTCTAGTGGTGTTTTCAGAAAACTTTGCAACCTCAAAGTGGTGTTTGGATGAACTCCTTACAATTCTTGAATGTAGAAAACATCATGATCAAATTGTTATACCGGTGTTCTATAAGATAGATCCATCACATGTTCGTAATCAGAAAGAGAGTTATGCGAAAGCATTTGCACAATATGAGAGAGAAAACAGGAAGAATGAATCCCTAAAAGAGAAGGTGTCTGCGTGGAAAACTGGACTCAAAGGTGCTGCCAGTATTTCAGGATGGGATTCTAGCAATTTTAGTGATGATGCTGTACTCATCGAAAATATTGTCGGAGATATTTGGCAAATGTTGAACCAGTTGAACCCTAAGAACTTGAAAGACATTCAAATTGATGAAAATTGTAAACAAGTTGAATCATTACTGGAAAACTACTCAAGAATCGGAATTTGGGGCATGGGTGGCCTAGGGAAGACAACCATAGCAAGACTCATGTTTGTGAAAAACTTTGCACAATATGACAGTGTATGCTTCATGGAAAAGGTTAAAGAAGAATCAGAAAAGCTGGGAATAACATACATACGTACAAAGATGTTTAGAGAACTACTAAAGAGAGAAATTTCTCCATCTGATGTTGTTGGAGACGGATTCATTAAGAGGTGGCTCAGGGGTAGAAAAGTTTTCCTCGTACTTGACAACGTCGATAATGTTGAACAATTAGAATATTTGTGTGGAGAATTTGGTGAACTTGGAACAGGTAGTAAACTCATTATCACAACAAGGGATAGACACACAGTTGCGCAAAAAGTTGATATAGTACATGAGGTCACAAAGTGGAGTTTTGAACAATCTTTAAAGCTTTTCATATTTGAAGCCTTCAAGCAAAGCCATCCCAAAAAGGGTTATGAGGGTCTCTCAGAAAAGGTGGTTGAATATGCAGGAGGTGTTCCGTTAGCTGTGAAAGTTTTGGCTTCTCATTGTGGTGTCAGAAGTCCTGAATTTTGGGACTCTGAATTGGATTATTTGAAGAATAAAGGAAAATCCCTGGTTGAAATTGAAGACGTGCTAAAAGTGAGCTATAATGGATTAACAAAGAGAGAGAAGGACATTTTTCTAGACATTGCATTCTTTTTTGAAGGTGAAAATAAAGATTTCACCACAAAGATACTAGATGCTTGTGATTTCGGTGCTACTAGTGGGATACAAATACTTGAAGATAAAGCTCTTGTAACTATTTCCAGCAATAGAATACAAATGCATGACTTACTACAAAAAATGGCTTTCAATATAGTTCGCAATGACCATGGAAAGCGTAGCCGATTGAGGGATATTGAAGAAGTTCGTGATGTACTTAAGTATAAAAAGGGGGCTGATGTTGTTGAAGGCATTATATTTGATTTGTCCCAAAAATCAAATTTATATGTCAAAGCCGACACATTCGAGATGATGGTTGATCTACGATTTCTTCGATTGTATGTCCCCTTGGGAAAGAAGAGATTGGCTACCTTGAACCATTCTGATCAAGGCATAATTCAATTTTCTGATAAACTTAGATACTTTGAGTGGAATGGATACCCTTTGAAGTGTCTTCCAGATCCTTTTTGTGCTGAGTTTCTTGTTGAGATTCGCCTGCCACATAGCAATGTAGAATATCTTTGGCACGGGACGCAGGAACTTGTGAATTTAGAGGCAATTGATCTAAGTGAGTGCAAACATTTGACCAACCTCCCTGATTTGTCTGAGGCGTCAAAACTCAAATCGTTGAACCTTTCCGGCTGTGAAAATTTGTGTGAAATTCAGCCTTCTATTTTTTCTAAGGACACACTTGTTACTTTGCTACTTGATAGGTGCAAAAAACTGCAGAGTCTCACGAGTGAGAAGCACTTAACATCTCTAGAGAAGATCAATATCTACGGTTGTTCAAGCCTTAAGGAGTTTTCATTGTCCTCTGATTCAATTGAAAGGTTGGACTTGAGCAATACAGGAGTTGAAATATTGAACTCATCAATCAATGGTATGAGCAAGCTTGTGTGGCTCAACTTAGAAGGTTTGAAACTCATGAATCTACCGAATGAGTTGTCTTGTTTGGGATTACTTACAGAACTTCGACTTTCAAACTGTGATATAGTAACTAAATCGAATTTAGAAGGCATATTTGATGGCTTGGGATCATTGAAAATACTATATTTGAAATATTGTGGCAACTTGCTTGAACTCCCTACAAACATCAGTTCTTTATCATCATTGTATGAGTTAAGACTAGATGGAAGTAGTGTGGAGACACTACCTTCAAGCATCAAGTTTCTCTCAGAGTTAGAGATTTTATGTTTAGATAATTGCAAAAAGCTTCATTCTCTCCCAGAGCTTCCTCTAGAAATCAAAGACTTCTGTGCAGAAAACTGCACTTCATTGGTCAATGTATCCACTTTCAAGTCATTTTCAAAAAAGATGAAAGAAAAAGAGAAATACATTTCATTCAAGAATGGCATTATGATGAATTCAAATCAACCTTCATTTGACATGCTTGTGGAAGATGTCGTATTAACAGCGAGGAGTGCTGCAATTCACAACCTATTCAAAATACTATATGGTTATGATGAAGACGGCTATGGGTATTTTTATAGCAAGGTAGCGGTTTGTTTACCAGGAAGCGCAGTTCCATTTGAGTTCCAATTCAGAACATCAGATTCCAAAATAACTCTTATATTTCCCGACATATGTAACTCATTCGAAATAATTTTCTCCATGGTTATTTCTCCAACCAATAGAATGCAGCAGAATGAGCATTGCAGTGGTGCTAAAATTCAATGTAAATGCTATGGGGAAGATGAAGATGTTGATTGGAGGGGATTTGTGTCTGAGTGGTATAGTGAACCTATTACGAATTTAAACATGGATCATGTTCTTGTGTGGTACAATCATGACACCTGTGTCGCCCCTGCTAAAAGAACAGTTTCCTTTGAATTCTTCATTTCAACTGATGTGCCAGAAAATGATGGCTTCTTCAGTATTAAAGAGTGTGGTATTTGTCCAATAGGGGGATAA 3216 0.3747 MCISHKKNDVFISFRGEDSRETFIIQLYHALKKQNIETYIDIKLERGDDVWSALEQAIQDSRISLVVFSENFATSKWCLDELLTILECRKHHDQIVIPVFYKIDPSHVRNQKESYAKAFAQYERENRKNESLKEKVSAWKTGLKGAASISGWDSSNFSDDAVLIENIVGDIWQMLNQLNPKNLKDIQIDENCKQVESLLENYSRIGIWGMGGLGKTTIARLMFVKNFAQYDSVCFMEKVKEESEKLGITYIRTKMFRELLKREISPSDVVGDGFIKRWLRGRKVFLVLDNVDNVEQLEYLCGEFGELGTGSKLIITTRDRHTVAQKVDIVHEVTKWSFEQSLKLFIFEAFKQSHPKKGYEGLSEKVVEYAGGVPLAVKVLASHCGVRSPEFWDSELDYLKNKGKSLVEIEDVLKVSYNGLTKREKDIFLDIAFFFEGENKDFTTKILDACDFGATSGIQILEDKALVTISSNRIQMHDLLQKMAFNIVRNDHGKRSRLRDIEEVRDVLKYKKGADVVEGIIFDLSQKSNLYVKADTFEMMVDLRFLRLYVPLGKKRLATLNHSDQGIIQFSDKLRYFEWNGYPLKCLPDPFCAEFLVEIRLPHSNVEYLWHGTQELVNLEAIDLSECKHLTNLPDLSEASKLKSLNLSGCENLCEIQPSIFSKDTLVTLLLDRCKKLQSLTSEKHLTSLEKINIYGCSSLKEFSLSSDSIERLDLSNTGVEILNSSINGMSKLVWLNLEGLKLMNLPNELSCLGLLTELRLSNCDIVTKSNLEGIFDGLGSLKILYLKYCGNLLELPTNISSLSSLYELRLDGSSVETLPSSIKFLSELEILCLDNCKKLHSLPELPLEIKDFCAENCTSLVNVSTFKSFSKKMKEKEKYISFKNGIMMNSNQPSFDMLVEDVVLTARSAAIHNLFKILYGYDEDGYGYFYSKVAVCLPGSAVPFEFQFRTSDSKITLIFPDICNSFEIIFSMVISPTNRMQQNEHCSGAKIQCKCYGEDEDVDWRGFVSEWYSEPITNLNMDHVLVWYNHDTCVAPAKRTVSFEFFISTDVPENDGFFSIKECGICPIGG* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0616 1071 SUPERFAMILY L domain-like 477 863 - -
Mal5g0616 1071 Gene3D - 3 176 IPR035897 -
Mal5g0616 1071 PANTHER NB-ARC DOMAIN PROTEIN 6 927 - -
Mal5g0616 1071 Pfam TIR domain 9 181 IPR000157 GO:0007165
Mal5g0616 1071 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 927 IPR044974 GO:0006952
Mal5g0616 1071 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
Mal5g0616 1071 Coils Coil 115 135 - -
Mal5g0616 1071 PRINTS Disease resistance protein signature 204 219 - -
Mal5g0616 1071 PRINTS Disease resistance protein signature 614 630 - -
Mal5g0616 1071 PRINTS Disease resistance protein signature 278 292 - -
Mal5g0616 1071 PRINTS Disease resistance protein signature 370 384 - -
Mal5g0616 1071 Gene3D Ribonuclease Inhibitor 708 881 IPR032675 -
Mal5g0616 1071 Gene3D Ribonuclease Inhibitor 521 707 IPR032675 -
Mal5g0616 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 431 IPR027417 -
Mal5g0616 1071 SMART till_3 7 149 IPR000157 GO:0007165
Mal5g0616 1071 Gene3D - 337 421 IPR042197 -
Mal5g0616 1071 Pfam NB-ARC domain 204 405 IPR002182 GO:0043531
Mal5g0616 1071 Gene3D - 177 331 IPR027417 -
Mal5g0616 1071 Pfam Leucine Rich Repeat 595 614 IPR011713 -
Mal5g0616 1071 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0616 Mal-Chr5 9776076 9794341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0616 4 832 WRKY Transcription Factor Family AT4G12020 30.999 2.36e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0616 - - cam:101489032 1225.31