Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0613 ATGATATTATTCATTAGCTTTAGAGGAGAGGACACACGTACAAACTTCACTGCCCAGCTTCATCAAGTTCTTACCAATAGAGATATCACAACATTCATTGATTATAATCTTGTAAAGGGTGATGAGGTTGGACCTGCTCTTGTCAAAGCAATCCAGGACTCACGTATTTCTATCGTGGTTTTGTCGGAAAACTATGCAACCTCAAAATGGTGTTTGGATGAACTACTCAAAATACTTGAATGTAGGAAAGATCATGGTCAAGTGGTTATACCTGTGTTCTATTACGAGATATCATTTGCAAAATACGAGAGAGAAAGCATTAACAATGAATCCTTCAAAGAGAAAGTGTTTAAATGGATAGCTGCTCTAACTTTGATCGCCAATATCTCCGGATGGGACTCTTCTACCCACAAGGATGATACTCACCTCGTTGAGAATATTGTGAAAGATGTTTGGCAAAAGTTGTCTCTGATGCATTCTTATGAATCAAAAGACCTTGTTCAAACTGATGAAAACATTGGATATACTGATTCACTACTGGAAAAATATCAAAGAATTGGAATTTGGGGCATGGGAGGAATAGGAAAGACTACCATAGCCAGACAGATGTTTGCCAAACACTTTGCACAATATGACAGCGCTTGCTTTATGGAAAATGTAAGTGAAGAAATAGAAAAGTCCGGACCAATGCATGTTCGTAGTAATCTTCTGTGTGAGCTACTAAATCGACAAATCAAAGCAACTGATCATGGATCCGCATCAATTAAGAGGATGCTTAGTGCTAGAAAAGTTTTCATAGTACTTGATGATGTTGATAATTCTTTCATATTAAATTATTTATGTGAAGATCTTGGTAACCTTGGACCACACAGTAGAAGCATTATCACAACGAGAGATAAACATATTCTGAGTGGAACAGTTGATAAGATATATGAGGTAACAAAATGGAAGTTTGAAGAATCTCTAAAGCTTTTTAGTTTAGGAGCCTTCAAGCAAAGTTTTCCTATAGAAGGTTACAAGCATTTTTCAGAAAGGGCAGTCGAATATGCAGGAGGTGTTCCATTAGCTTTAAAAGTTCTGGGTTCATTTTTTTATTCAAGAAAATTTGAATTCTGGAAATCTGAATTGAATCATCTAGAGAAAAAAGGCGAATCCTTGGGCGAAATTCAACAAGTTTTGAAAGTGAGTTATAATAGATTAAGATTGCGAGAGAAGAAAATATTTTTGGACATTGCATTCTTTTTCAAAGATGAAAATAAAGATTTTGTCATAAGGATACTTGATGCATGTGGTTTCAATGGTAGCAGTGGAATACAGATCCTTGAAGATAAAGCTCTTATAACAATTTCAAACAGAAACAGAATACAAATGCATGACTTGCTACAAAACATGGCTTTCGATATAGTTCACACAGGCCCTGAAAAGCTTAGCCGATTGAGAGATAGCGAAGAAATTAGCGATGTTCTAAAAAGCAAAAAGGATGTTGATGCAGTTGAAGGCATAATATTTGATTTGTCTCATAAAGGAGATTTATATATCCAAGCTAACACATTCAACAAGATGACTTATTTAAGGTTTCTTAGATTATATGTTCCCTTGGGTAAGAAGAGATCTACTATCTTGTATCCTCCTGATCAAGATATTATGCCATTCTCTGATAAATTGAGATACTTTGAGTGGAGTGAATACCCTTTTAAGTCTCTTCCACATCCTTTTTGTGCTAAGCTGCTTGTTGAGATTCACTTGCCGCGCAGCAATATAGAACATATTTGGGACGGAAATCAAGAACTAGTGAATTTAGAGACAATCAACCTAAGTGAATGCAAGAAGTTGATCAAACTTCCTGATCTGTCAATAGCAGTCAAACTCAAATGCCTCAATCTTTCAGATTCAATTGAAAGATTGGATATAAGCAACACAGGAATTGAAAAATTGTACCCATCAATCGGTTGCATGAAGAAGCTCATGTGGCTCAATTTAGAAGGCTTGCCGCTTAAGAATCTACCGAAAGAATTGTCTGGCCTGAGATCACTTACTGAGCTTTGGATTTCTAATTGCAACATAGTAACTAAATCCAAGTTAGAAGCCATATTCGATGGCCTGGAATCATTGACAATATTATATCTGAAAAACTGTCGTAAATTGATTGGAATCCCTTCCAACATCACTTCCTTATCATCATTATCTGAATTAAGACTAGATGGTAGCAATGTGAGGAACTTGCCTGCAAACATCAAAAAGGATGAATGGAAAGGAGATATACATTTCATTCAAGAATTGCAAGAATTTGGATGA 2295 0.3582 MILFISFRGEDTRTNFTAQLHQVLTNRDITTFIDYNLVKGDEVGPALVKAIQDSRISIVVLSENYATSKWCLDELLKILECRKDHGQVVIPVFYYEISFAKYERESINNESFKEKVFKWIAALTLIANISGWDSSTHKDDTHLVENIVKDVWQKLSLMHSYESKDLVQTDENIGYTDSLLEKYQRIGIWGMGGIGKTTIARQMFAKHFAQYDSACFMENVSEEIEKSGPMHVRSNLLCELLNRQIKATDHGSASIKRMLSARKVFIVLDDVDNSFILNYLCEDLGNLGPHSRSIITTRDKHILSGTVDKIYEVTKWKFEESLKLFSLGAFKQSFPIEGYKHFSERAVEYAGGVPLALKVLGSFFYSRKFEFWKSELNHLEKKGESLGEIQQVLKVSYNRLRLREKKIFLDIAFFFKDENKDFVIRILDACGFNGSSGIQILEDKALITISNRNRIQMHDLLQNMAFDIVHTGPEKLSRLRDSEEISDVLKSKKDVDAVEGIIFDLSHKGDLYIQANTFNKMTYLRFLRLYVPLGKKRSTILYPPDQDIMPFSDKLRYFEWSEYPFKSLPHPFCAKLLVEIHLPRSNIEHIWDGNQELVNLETINLSECKKLIKLPDLSIAVKLKCLNLSDSIERLDISNTGIEKLYPSIGCMKKLMWLNLEGLPLKNLPKELSGLRSLTELWISNCNIVTKSKLEAIFDGLESLTILYLKNCRKLIGIPSNITSLSSLSELRLDGSNVRNLPANIKKDEWKGDIHFIQELQEFG* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0613 764 Gene3D - 153 313 IPR027417 -
Mal5g0613 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 629 IPR044974 GO:0006952
Mal5g0613 764 SMART till_3 4 129 IPR000157 GO:0007165
Mal5g0613 764 Gene3D - 317 401 IPR042197 -
Mal5g0613 764 Pfam TIR domain 3 163 IPR000157 GO:0007165
Mal5g0613 764 Gene3D - 2 152 IPR035897 -
Mal5g0613 764 ProSiteProfiles TIR domain profile. 1 155 IPR000157 GO:0007165
Mal5g0613 764 SUPERFAMILY L domain-like 503 744 - -
Mal5g0613 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 629 747 IPR044974 GO:0006952
Mal5g0613 764 Gene3D Ribonuclease Inhibitor 631 750 IPR032675 -
Mal5g0613 764 PRINTS Disease resistance protein signature 595 611 - -
Mal5g0613 764 PRINTS Disease resistance protein signature 185 200 - -
Mal5g0613 764 PRINTS Disease resistance protein signature 258 272 - -
Mal5g0613 764 PRINTS Disease resistance protein signature 350 364 - -
Mal5g0613 764 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 132 IPR035897 -
Mal5g0613 764 Pfam NB-ARC domain 185 398 IPR002182 GO:0043531
Mal5g0613 764 Gene3D Ribonuclease Inhibitor 498 630 IPR032675 -
Mal5g0613 764 PANTHER NB-ARC DOMAIN PROTEIN 6 629 - -
Mal5g0613 764 PANTHER NB-ARC DOMAIN PROTEIN 629 747 - -
Mal5g0613 764 SUPERFAMILY "Winged helix" DNA-binding domain 388 473 IPR036390 -
Mal5g0613 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 411 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0613 Mal-Chr5 9736619 9743520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0613 8 747 WRKY Transcription Factor Family AT4G12020 31.291 2.32e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0613 - - mtr:MTR_8g018060 962.214