Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0612 ATGTCTTCCTCTTCGAAAAAGTACGATGTATTCATTAGCTTCAGGGGCCAAGATACACGCGAAACATTCACAAGCCATCTTCATTATGCTCTCTGCAAGGAAAACATCATAACATACATTGATGATAATCTTGTAAAGGGAGATGAAATTGGTGAAGCACTTGCTCAAGCAATCCAAGACTCACGCATATCACTCGTTGTTTTCTCCAAAAATTATGCAACCTCAAAGTGGTGCTTGAACGAACTCCTCAAAATACTTGAATGCAGAAAACATCATGGTCAAGTTGTTATACCTGTGTTCTATAACACATATACATCACAAGTACGTAATCAAACAGGGAGTTATGAGAAACCGTTCTCAGACTATGAGATAGAAGCCATCAACAATGATTCCTTTGCAAACACTGTTTCTCAGTGGAGAGCTGCTCTCACGGAAGCCGCTAATATACCTGGATGGGATAGTCAAAGTCGTACCTATAAGGACGATTCTCAAGTGATTCAGAGCATTGTGAGTGATGTTTGGAAGAAGCTAGCCTTAATGTATCCTAATGAACTGAAAGGCCTTGTTTATAATGATGAACACATTGATTATATTGAGTCACTATTGGAAAGATATCCAAAAATTGGAATTTGGGGCATGGGTGGAATAGGGAAGACAACCATAGCCAGACAGATGTTTGCAAAGCACTTTGCACAATATGACAGCGCTTGCTTTATGGAAAATGTAAGTGAAGAAATAGAAAAGTCTACACTAACATTAGTCCGTAACAAGCTTTTTAGTGAGCTGCTAAAGCGAGAAATTACTGCATCTGATTTTCTTGGAGCCGCATTCATTGAGAGGATGCTCAGCGGTAAAAAAGTTTTTGTTGTACTTGATGATGTGAGTAATGCTGCACAATTAGAATATTTGTGTGCAGAACTTGATGACCTTGGACCAAACAGTAGACTCATTCTCACGACAAGAGATAGGCACATGCTCAGTGGAAGAGTTGATGATATATACTAG 1005 0.391 MSSSSKKYDVFISFRGQDTRETFTSHLHYALCKENIITYIDDNLVKGDEIGEALAQAIQDSRISLVVFSKNYATSKWCLNELLKILECRKHHGQVVIPVFYNTYTSQVRNQTGSYEKPFSDYEIEAINNDSFANTVSQWRAALTEAANIPGWDSQSRTYKDDSQVIQSIVSDVWKKLALMYPNELKGLVYNDEHIDYIESLLERYPKIGIWGMGGIGKTTIARQMFAKHFAQYDSACFMENVSEEIEKSTLTLVRNKLFSELLKREITASDFLGAAFIERMLSGKKVFVVLDDVSNAAQLEYLCAELDDLGPNSRLILTTRDRHMLSGRVDDIY* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0612 334 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 326 IPR044974 GO:0006952
Mal5g0612 334 PANTHER NB-ARC DOMAIN PROTEIN 6 326 - -
Mal5g0612 334 SMART till_3 7 149 IPR000157 GO:0007165
Mal5g0612 334 Gene3D - 179 331 IPR027417 -
Mal5g0612 334 Pfam NB-ARC domain 204 325 IPR002182 GO:0043531
Mal5g0612 334 Pfam TIR domain 7 183 IPR000157 GO:0007165
Mal5g0612 334 Gene3D - 2 178 IPR035897 -
Mal5g0612 334 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Mal5g0612 334 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
Mal5g0612 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 327 IPR027417 -
Mal5g0612 334 PRINTS Disease resistance protein signature 207 222 - -
Mal5g0612 334 PRINTS Disease resistance protein signature 281 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0612 Mal-Chr5 9725161 9726770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0612 3 334 WRKY Transcription Factor Family AT4G12020 31.765 1.45e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0612 - - mtr:MTR_8g017800 580.482