Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0602 ATGGGTGGTTCAGGAAGCTGGTTTAAATCACTTATAAGAAAACCCTCTACCAATAATCATGAGAAGGGTATTGATAAGAGTAAGAGAAAATGGAGGCTATGGGGAAATTCTTCAGAAGTTATTGGATTTGGAACTTCTTTGAAGAAGGGGCATAGTTTTGGTGCTTATGATAAATATTCTTGTTCATCGTTTGTGGTGAATGAAGAAGCTTTTGCTGCTGCAATGGCTGCTGTGGTAAGAACTCCACACAAAGACTTCTTGCTGATCAAGCAGGAATGGTCTGCCATCCGTATCCAATCTGCTTTTCGAGGCTTCTTGGCAAGAAGAGCTTTGAGGGCCTTGAGGGCACTGGTTAGGCTGCAAGCTATAGTTCGTGGCCGGTTAGTTAGAAAACAAGCAGCTGTTACTCTAAGATGCATGCAGGCTCTCGTGCGAGTTCAAGAACGTGTCAAGGCAAAGAATGTTAGGAATTCTCCAGGAAAGAAAGCTAAGCAGAAACTAATAAATGAGCATCACAATCAAGCTGATCCTGTTAAACAAGCTGAGCAAGGGTGGTGTGACATACCAGGAACTGTGGAAGAAGTTAAAGCAAAACTAAAAACGAGGCAAGAAGGAGCAATTAAGAGAGATAGAACAATGTCATACACCAATTCCACCGTGCGATCAACAGCGAGTTCTAGTCCAAGCTCAAGAGGTTCTAAGCCATTGACTCCTCTCAAGCACCGCAGTGTAGACGGTAAGAGCATGTTAGAACGCTGGATTGCAGCCAAGCCATGGGAAAGCAGGTTGATGGGAGACATCTATTTGGACTCACCTGACATGACTCCATTGTCCAAGAAGAGTGAGAATGTCGAACTCTCCGTTAACTCATATCAACAAAATGCCTTAGTAAAAGCAAGAAAGAATGGTGTAACAACTAGGATTTCATCTAAATCTCTTACAACAACTCAATCAACTCCTTCTTCTTCGGCTATAAGCTCCGAATGCATGTATGATGATAGCCCTTTATCAACTTCATCCACATCTGAATCACCAACCAAGGTGGAAGATGCAAAGGAAAGGAAACTCGGGAAACCGAGCTACACTAATTTGACAGCGTCAACCAAAGCTAAGCTGAAAGCGTGTAGGCATTCGTCTCCGAATTTGAAGAGGCTCTTTATGTATGATGATTGTCTGTCTCATAGCGCGCGAACAAACTTTCTAACCGCAGATACTAGAAGCATTTCTGGTTCTTATTCTTCAGCTAATATATGGAAGGATCTTTATGCAACTCCTTTAAGGACAAGTTATCAGAAACAATTTACAATGGGAGATAAGTAG 1320 0.4227 MGGSGSWFKSLIRKPSTNNHEKGIDKSKRKWRLWGNSSEVIGFGTSLKKGHSFGAYDKYSCSSFVVNEEAFAAAMAAVVRTPHKDFLLIKQEWSAIRIQSAFRGFLARRALRALRALVRLQAIVRGRLVRKQAAVTLRCMQALVRVQERVKAKNVRNSPGKKAKQKLINEHHNQADPVKQAEQGWCDIPGTVEEVKAKLKTRQEGAIKRDRTMSYTNSTVRSTASSSPSSRGSKPLTPLKHRSVDGKSMLERWIAAKPWESRLMGDIYLDSPDMTPLSKKSENVELSVNSYQQNALVKARKNGVTTRISSKSLTTTQSTPSSSAISSECMYDDSPLSTSSTSESPTKVEDAKERKLGKPSYTNLTASTKAKLKACRHSSPNLKRLFMYDDCLSHSARTNFLTADTRSISGSYSSANIWKDLYATPLRTSYQKQFTMGDK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0602 439 SMART iq_5 90 112 IPR000048 GO:0005515
Mal5g0602 439 SMART iq_5 113 134 IPR000048 GO:0005515
Mal5g0602 439 MobiDBLite consensus disorder prediction 211 242 - -
Mal5g0602 439 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Mal5g0602 439 MobiDBLite consensus disorder prediction 309 358 - -
Mal5g0602 439 PANTHER IQ-DOMAIN 5-RELATED 1 437 - -
Mal5g0602 439 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Mal5g0602 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 133 IPR027417 -
Mal5g0602 439 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Mal5g0602 439 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Mal5g0602 439 MobiDBLite consensus disorder prediction 309 345 - -
Mal5g0602 439 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 437 - -
Mal5g0602 439 MobiDBLite consensus disorder prediction 211 236 - -
Mal5g0602 439 Gene3D - 89 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0602 Mal-Chr5 9582203 9585162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0602 1 422 IQD Protein Family AT1G72670 41.763 1.41e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0602 - - ahf:112710157 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0405 4 3395537 3398252 Mal5g0602 5 9582203 9585162 PCT