Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0566 ATGGAGGAAACGCCTACAATCCTTCATGGAACAATTGAAGCTACTATCTTCAATGCCTCACATTACACGTCCTTTTTCCCTTTCAATTGCATATGTACAAATGGAGAGCCTGCTTATGTGACCATCAAGATAGACAACAAGAAGGTTGCAAAAACCAGCAAAGAAAGAAATCGTGTTTGGAACCAAACCTTTCATATTCAATGTGCTCATCCACCTAATTCAGTTATCACCATTACATTGAAAACATTAAATTCTAAATTAGGAAAATACAATATCAAGGCCCAACAAATTTTGAAAGAAGGAAGTATAATCAATGGAATATTTCCTCTCCTCATGGAAAATGAAAAACCAAACCCAAAACTTAAATTGAAATTTATATTATGGTTTAAGCCTGCAAAATTGGAACAAAGTTTGGCAAAGGTACTAAGCAATAGGGAATTTCAAGGGCTAAAGGATGCAAAATTTCCACTAAGGTCCAATTGTCAAGTCAAACTTTATCATGATGCTCATCATTCCCCTACCTTCGAACCTCCTTTTGATCCATGTGGTACTCCAAAAAATTTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGCATATAGTTTATATTGCAGCTTGGTCTCTAAATCCCAAGATGGTTTTGGTTAGAGATCCCCATACAGAAATCCAACATGCCAGAGGAATGAATTTGGGTGAGCTATTGAAAAAGAAGGCAGATGAAGGAGTGATTGTGAGAGTTATGCTGTGGGATGATGAAACATCTTTGCCTTTTATTAAGAACAAAGGTGTAATGAACACACATGATGAGGATGCTCTTACATATTTCAATCACACAAAAGTAATATGCAAAAAATGTCCTAGATTGCACCACAAATTCCCAACACTATTTGCTCACCATCAGAAAACTATAACAGTAGACACCAAAGTGCTTAAATCTGTTAGTGATAGAGAAATTATGAGCTTTGTTGGTGGATTAGATTTGTGTGATGGTAGATATGATACAGAACAACATTCATTGTTTCAAACACTCATTAAGGAATCACATTGTTATGACTTTTACCAACCAAACATTGAAGGAGCTAACCTTAACAAAGGAGGACCAAGAGTGCCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAAGCTGCTTGGGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTCTTCTAGTCCCTACTAGCACTTTGATGAATCTTATTCCTCAAGCAAACTCAAATACTTCAATTGAAAGTAATTGGAAAGTTCAAGTTTATAGGTCTATTGATCATACTTCTGTTGATGATTTGTGTGGAAATTTCAATGTGGAGAGTAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCATGCTGAGAGGTTCATATACATTGAAAACCAATACTTTATTGGAGGATGCCAATGGTGGGGAAAAGATAAGCATTGTGGCTGCACAAATCTAATTCCAATTGAAATTGCACTTAAGGTGGTAAGTAAGATCAAAGCAAAAGAGAGATTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATCTGTTCAAGATATATTGCATTGGACAAGAGAAACTGTGGCAATGATGTATAGGTTGATTGGTGAAGCAATAAAAGAAAGTGGTGAAATAGGACATCCAAGAGACTACTTGAATTTCTTTTGTCTTGCAAATAGGGAGCATAAGGGAAAAGGAGAGTATCGTCCATTAGACTCCCCTCACGATGAAACACAATACTGGAATGCACAGAAAAATAGAAGATTCATGGTTTATGTTCATTCCAAGCTCATGATAGTGGATGACATGTACATATTAATAGGTTCAGCTAATATGAACCAAAGATCCATGGATGGGAAAAGGGACACTGAGATTGCCATAGGATGCTTCCAATCTCAAGATGAAGTTGAGAAACAAATGAACCTAGGTGATGTTCATGCATATAGAATGGCACTATGGTATGAGCACACAAATAGTGTTGATGAATTGTTCTTAGAGCCACAAAATTTGGAATGTGTGAAAAGGATGTGTTCAATTGGAGATCAAATGTGGGAAATCTATAGCAATGATGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGGGTAACACAAGAAGGGTATGTGAAAGACTTGAGTAATGGAGTTTATTTTCCTGATACAAATTCTCTAGTGAAGGGGAAGAGATCTACATTGTTGCCCCCTAACTTGACCACTTAG 2277 0.3702 MEETPTILHGTIEATIFNASHYTSFFPFNCICTNGEPAYVTIKIDNKKVAKTSKERNRVWNQTFHIQCAHPPNSVITITLKTLNSKLGKYNIKAQQILKEGSIINGIFPLLMENEKPNPKLKLKFILWFKPAKLEQSLAKVLSNREFQGLKDAKFPLRSNCQVKLYHDAHHSPTFEPPFDPCGTPKNLWEDVYKAIEGAKHIVYIAAWSLNPKMVLVRDPHTEIQHARGMNLGELLKKKADEGVIVRVMLWDDETSLPFIKNKGVMNTHDEDALTYFNHTKVICKKCPRLHHKFPTLFAHHQKTITVDTKVLKSVSDREIMSFVGGLDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIEGANLNKGGPRVPWHDAHACVIGEAAWDVLTNFEQRWTKQCDPSLLVPTSTLMNLIPQANSNTSIESNWKVQVYRSIDHTSVDDLCGNFNVESSIHEAYVEAIRHAERFIYIENQYFIGGCQWWGKDKHCGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESESVQDILHWTRETVAMMYRLIGEAIKESGEIGHPRDYLNFFCLANREHKGKGEYRPLDSPHDETQYWNAQKNRRFMVYVHSKLMIVDDMYILIGSANMNQRSMDGKRDTEIAIGCFQSQDEVEKQMNLGDVHAYRMALWYEHTNSVDELFLEPQNLECVKRMCSIGDQMWEIYSNDEIVDMEGVHLVTYPMRVTQEGYVKDLSNGVYFPDTNSLVKGKRSTLLPPNLTT* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0566 758 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Mal5g0566 758 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Mal5g0566 758 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 125 IPR035892 -
Mal5g0566 758 Gene3D Endonuclease Chain A 175 428 - -
Mal5g0566 758 Gene3D C2 domain 29 130 IPR035892 -
Mal5g0566 758 PANTHER PHOSPHOLIPASE D 5 758 IPR015679 -
Mal5g0566 758 Gene3D Endonuclease Chain A 446 657 - -
Mal5g0566 758 PANTHER PHOSPHOLIPASE D ALPHA 5 758 - -
Mal5g0566 758 SMART pld_4 604 631 IPR001736 GO:0003824
Mal5g0566 758 SMART pld_4 296 333 IPR001736 GO:0003824
Mal5g0566 758 Pfam C2 domain 38 110 IPR000008 -
Mal5g0566 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Mal5g0566 758 SUPERFAMILY Phospholipase D/nuclease 427 687 - -
Mal5g0566 758 Pfam Phospholipase D C terminal 676 747 IPR024632 -
Mal5g0566 758 SUPERFAMILY Phospholipase D/nuclease 149 408 - -
Mal5g0566 758 PIRSF PLD_plant 3 758 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mal5g0566 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0566 Mal-Chr5 8800481 8804434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0566 30 758 Phospholipase D Gene Family (Wang group) AT1G55180 62.027 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0566 K01115 - gmx:100812642 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0566 5 8800481 8804434 Mal5g0566 5 8800481 8804434 ECH
Mal4g0376 4 2892274 2895949 Mal5g0566 5 8800481 8804434 PCT