Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0563 ATGAGTCGAGAGCAGCAGAAGAGGGGGAAACAAGAGAAAGGATGTGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCATCAAAGGAAATTCCGAAGACTGCTCTTGTTTGGTCACTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTAGTGGTTGTTCCTTCACAAAGTTCAGGTAGAAAATGGGGTTTTCCTAGATTTGCTGGTGACTGTGCCAGTGGTATGAAGAAGTACCCTCCAGGAACAATTTTAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATACTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCGGGATCACCTTGTGGATCAGTGGCTGCAGAAGCCAAGAAAGGACAAGCCAGTTGGGTTGTATTAGACAAACATCTCAAACCTGAGGAAAAGAAATGCATGGAAGAGCTGCAGTGTAACATTGTTGTTATGAAGCGTGCTCAACCGAAAGTGCTTCGCTTGAACTTGATTGGACCACAAAAGAAGGAAGTTGAAGAAGCATGTACATCACCTTCTGTGCAAGACGATATGCTTGAAAAGCAAACCAAAAATAAGATTGATTCTTTAGTAGATTCTATCAAAGGACCGAATGTTACTCCAACTAGCAGCCCTGAGTTAGGTACACCATTCACTACTACTACTGATGCTGGTACTTCATCAGCTTCAAGCTCTGATCCTGGAACATCACCGTTCTTTATCTCAATGAATGGTGAGTCGAAGAAAGAGGAAACCATTAAGGAAAGTCAAGAACTTTGTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCTGCTAGCTTTAGATACCAGCCGTGGATCAATGAAGTGCTTTTACATCAACAATCATCTCAACGCAACGAGTCAGAGGGATATCATGGTATTCCTCAAGCAACTACAACCAAAGCTTTGCTAGAAAAGTTTTCTAGGCTTGATAGAGGAGGTGGAATTGAAATGTCAGCAGCGTATAGAAATGACTCTGATTTTAGTGGTAATTTAAGAGAAGCAATAGCATTATCAGGAAATGCTCCACTCGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCACCTGTCTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAACTCGCTACCGGTGGATTTTCACAAGCTAACTTCTTGGCAGAAGGAGGGTATGGTTCTGTTCACCGAGGGGTTCTACCAGAAGGACAGGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTTGAGTTTTGCTCCGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAAACAAAGAGATCCATTAGAATGGTCCGCGCGGCAGAAAATTGCTGTTGGAGCTGCTCGCGGGTTAAGGTATCTTCATGAAGAGTGCAGAGTAGGTTGTATCATCCACCGTGACATGAGGCCAAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACATGGGTGTGGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTCGTTACTGGTAGAAAAGCTGTTGATCTCACTAGGCCCAAGGGACAACAGTGCCTTGCTGAGTGGGCACGACCATTGTTAGAAGAATATGCGATTGACGAACTGATTGACCCGAAGCTGGGAGGTCACTATTTAGAACATGAGGTCTATTGCATGCTTCATGCTGCTTCATTATGCATAAGGAGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATTCTAGAGGGTGACATGGTCATGGACGCAAATTACATTTCAACTCCAGGCTATGATGTGGGAAACAGGAGCGGTCGCATTTGGTCAGAGCCACTGCAGAGGCAAAGCCATTACAGTGGTCCCCTCTTAGAAGATTCATTGGAGTCATCATTCAGTGGAAAGCTATCTCTTGACAAGTACAAGCCTGCTAGTTATTGGGATAATAGAGGTAGGGACAAGCCTAGAAGAGCCTCATGTGAAGATGATATTTAA 2265 0.4336 MSREQQKRGKQEKGCDGAEKVIVAVKASSKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKWGFPRFAGDCASGMKKYPPGTILEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGSVAAEAKKGQASWVVLDKHLKPEEKKCMEELQCNIVVMKRAQPKVLRLNLIGPQKKEVEEACTSPSVQDDMLEKQTKNKIDSLVDSIKGPNVTPTSSPELGTPFTTTTDAGTSSASSSDPGTSPFFISMNGESKKEETIKESQELCDTNSDTESESLSTSSASFRYQPWINEVLLHQQSSQRNESEGYHGIPQATTTKALLEKFSRLDRGGGIEMSAAYRNDSDFSGNLREAIALSGNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGKQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLAEWARPLLEEYAIDELIDPKLGGHYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDANYISTPGYDVGNRSGRIWSEPLQRQSHYSGPLLEDSLESSFSGKLSLDKYKPASYWDNRGRDKPRRASCEDDI* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0563 754 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Mal5g0563 754 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Mal5g0563 754 Gene3D HUPs 5 166 IPR014729 -
Mal5g0563 754 MobiDBLite consensus disorder prediction 260 274 - -
Mal5g0563 754 MobiDBLite consensus disorder prediction 208 288 - -
Mal5g0563 754 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Mal5g0563 754 SUPERFAMILY Protein kinase-like (PK-like) 387 681 IPR011009 -
Mal5g0563 754 CDD STKc_IRAK 409 675 - -
Mal5g0563 754 PANTHER OS01G0253100 PROTEIN 16 708 IPR045271 GO:0004714|GO:0006468
Mal5g0563 754 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0563 754 MobiDBLite consensus disorder prediction 215 256 - -
Mal5g0563 754 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Mal5g0563 754 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0563 Mal-Chr5 8783683 8788190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0563 342 669 Trihelix Transcription Factor Family AT1G68690 50.301 3.54e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mal5g0563 PK_Tyr_Ser-Thr 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0563 - - cam:101503019 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0563 5 8783683 8788190 Mal5g0563 5 8783683 8788190 ECH
Mal4g0373 4 2870146 2873965 Mal5g0563 5 8783683 8788190 PCT