Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0558 ATGATTGCACAAGATGAACGTCTTAGATCAACTTCAGAGATTTTGAATAGTATGAAGATCATTAAGTTACAGTCATGGGAAGAAAAATTCAAGAACTTAATTGAGTTGTTGCGCGATGAAGAGTTTTTATGGTTGTCTAAGGCACAGATCCTTAAAGCTTTTGGATCATTTCTTTATTGGATGTCTCCTACAGTTATATCTGTTGTTGTCTTCCTTGGATGCGCTGTTACCAAGAGTGCACCATTGAATGCTGAAATCGTTTTTACAATTCTTGCAACACTGAGGAACATGGCAGAACCTGTTAGGATGATCCCTGAGGCTCTGTCCATTCTGATTCAAGTTAAGGTTTCATTCGAACGTCTCAATAACTTTCTGCTTGATGAAGAGCTAAACAATGATGATAGTGAAAGAAACTTTAAGCAATGTTCGGTTAATGCTTTGGAAATTCAAGATGGCAACTTCATTTGGGACCCTGAATCTGTATCTCCAACTTTAACAGATGTAAATTTAGAAATCAAAGGAGGACAGAAAATAGCAGTTTGTGGACCAGTTGGAGCCGGAAAATCATCACTTTTGTATGCAATACTTGGAGATATTCGGATCAACATGAGCGGCGGACAGAAGCAGAGGATTCAACTAGCCAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGACGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAGGAGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCTGAAGTTGATACTATCTTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAAAATCTCCTGACCGCTGGAACAGCCTTTGAACTACTTGTGAGTGCACATAAGGAGACAATTACTGAGTTGAATCAAGATCATGAAAATAAAGGAGGTTCTGAATTTGAGGTTTTGACTAAAAATCCTCAAGACTCTCATGGTTTTAATCTCGCTAAAAATCAAAGTGAGGGAGAGATTTCTAGTATCAAGGGTCCAACTGGTGCACAACTTACACAAGAGGAAGAAAAAGTGATTGGAAATGTTGGATGGAAGCCATTTTGGGATTATATTAGTTATTCCAAAGGGTCATTCATGTTGTGTTTGATCATTTTAACACAATCTGTTTTTTTGGCTTTGCAGACTTCATCAACCTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACTAATGCCACCTTGATTGGAGTTTACTCATTAATTTCTTTTTCTAGTGCTGCTTTTATATATGTAAGAACTTACTTGACTGCACTTTTGGGATTAAAAGCTTCTACTGCTTTCTTCTCAAGCTTCACTACAGCTATCTTCAGTGCTCCAATGTTTTTCTTTGATTCAACTCCTGTAGGAAGGATTTTAACAAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATGCCATCACCTTTGTAGCATCTATATCACTTGAAATTTTGGTGGTTACTTGTATAATGGTTTCAGTCACATGGCAAGTTTTCATTGTTGCTGTTCCTGCAACCGTTGCATCAATATTCATTCAGCGATATTATCAAGCCACTGCAAGGGAACTAATACGGATCAACGGAACCACCAAAGCGCCAATAATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAATATGGCAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGGCAATGGAGTGGGTGGTTTTGAGGATTGAAGCACTTCAAAATGTAACTGTCATCACTGCAGCTTTGTTGCTTATTCTACTTCCTCAGGGATATGTATCCCCAGGCCTTGTGGGACTGTCTCTTTCCTATGCTTTTACCTTGACAGGAGCCCAAATATTTTGGACTAGATGGTTTTCCAACTTATCAAACTATATTATCGCTGTTGAAAGAATCAAGCAATTCATTTACATACCAGCTGAGCCTCCTGCCATTGTGGATGATAATCGACCTTCATTTTCGTGGCCTTCCAAGGGGAAGATTGACCTTCAAGGCTTAGAGATTAGATATCGTCCTAATAGTCCATTAGTCCTTAAGGGAATCACTTGTACTTTTAAAGAAGGATGTCGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACATTGATCAGTGCTTTGTTTCGCTTGGTTGAGCCTTCAAAAGGAAATATTCTTATCGATGGGGTTAACATATGCTCAATCGGGTTGAGGGATTTGAGAAGGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGGACAAACCTAGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGTGATTGAACTAATATCAAAATGTCTAATTCTGATAAGTTTTGCAGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAAAGGCAAGTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTTGATGAAGCTACAGCCTCCATTGACTCTGCTACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTTGCTCACAGAGTTCCAACTGTTATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTGGTGGAATATGATGAACCTTCAAAGCTAATGGACACAAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCTAGCTGCAGGAAGAGTTCCTTCCCAAACATTAGGCAGCAACTATGA 2835 0.3887 MIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLIELLRDEEFLWLSKAQILKAFGSFLYWMSPTVISVVVFLGCAVTKSAPLNAEIVFTILATLRNMAEPVRMIPEALSILIQVKVSFERLNNFLLDEELNNDDSERNFKQCSVNALEIQDGNFIWDPESVSPTLTDVNLEIKGGQKIAVCGPVGAGKSSLLYAILGDIRINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALGEKTVILVTHQVEFLSEVDTILVMEGGKVIQSGSYENLLTAGTAFELLVSAHKETITELNQDHENKGGSEFEVLTKNPQDSHGFNLAKNQSEGEISSIKGPTGAQLTQEEEKVIGNVGWKPFWDYISYSKGSFMLCLIILTQSVFLALQTSSTFWLAIAIEIPKVTNATLIGVYSLISFSSAAFIYVRTYLTALLGLKASTAFFSSFTTAIFSAPMFFFDSTPVGRILTRASSDLSILDFDIPYAITFVASISLEILVVTCIMVSVTWQVFIVAVPATVASIFIQRYYQATARELIRINGTTKAPIMNFAAETSLGVVTVRAFNMADRFFKNYLKLVDTDASLFFHSNVAMEWVVLRIEALQNVTVITAALLLILLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNYIIAVERIKQFIYIPAEPPAIVDDNRPSFSWPSKGKIDLQGLEIRYRPNSPLVLKGITCTFKEGCRVGVVGRTGSGKSTLISALFRLVEPSKGNILIDGVNICSIGLRDLRRKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKVIELISKCLILISFAVSDEGGNWSLGQRQVFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKSSFPNIRQQL* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0558 944 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 200 938 - -
Mal5g0558 944 Pfam ABC transporter 716 858 IPR003439 GO:0005524
Mal5g0558 944 Gene3D - 135 201 IPR027417 -
Mal5g0558 944 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 113 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0558 944 Pfam ABC transporter transmembrane region 3 92 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0558 944 Pfam ABC transporter transmembrane region 416 649 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0558 944 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 301 IPR003439 GO:0005524
Mal5g0558 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 689 926 IPR027417 -
Mal5g0558 944 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 1 199 - -
Mal5g0558 944 Gene3D - 202 322 IPR027417 -
Mal5g0558 944 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 199 - -
Mal5g0558 944 SUPERFAMILY ABC transporter transmembrane region 370 681 IPR036640 GO:0005524|GO:0016021
Mal5g0558 944 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 701 927 IPR003439 GO:0005524
Mal5g0558 944 SUPERFAMILY ABC transporter transmembrane region 3 127 IPR036640 GO:0005524|GO:0016021
Mal5g0558 944 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 200 938 - -
Mal5g0558 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 291 IPR027417 -
Mal5g0558 944 Gene3D ABC transporter type 1, transmembrane domain 1 134 IPR036640 GO:0005524|GO:0016021
Mal5g0558 944 CDD ABC_6TM_ABCC_D2 381 674 IPR044726 GO:0140359
Mal5g0558 944 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 387 649 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0558 944 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Mal5g0558 944 SMART AAA_5 725 911 IPR003593 -
Mal5g0558 944 SMART AAA_5 174 278 IPR003593 -
Mal5g0558 944 CDD ABCC_MRP_domain2 697 911 - -
Mal5g0558 944 Pfam ABC transporter 202 230 IPR003439 GO:0005524
Mal5g0558 944 Gene3D - 682 927 IPR027417 -
Mal5g0558 944 Gene3D ABC transporter type 1, transmembrane domain 349 679 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0558 Mal-Chr5 8655981 8673922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0558 697 942 Calmodulin-binding Proteins AT2G36910 30.000 2.66e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0558 - - gmx:100784827 1162.9