Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0557 ATGGCTTACTTTGAGAACACAATAGGTGAAATTTCATGGATTTGTCTGAAGAATTTTGATTTCAATTCTTTATGTTCTCAAAGGAGCTTAATAGACACTATCAATATACTCTTTGTATGTGTCTATTACACATCTTTGATTATAACTTTAATCAGAAAAAGTTCTACAAATGGAAGCCACAGAAAATGCTGGATTTTCCTTATTGTCTCAATTTGTTGTGGTGCTGTTAGCATTGCATTTTTCAGTATTGGATTGTTTAATCTCATAGCTAAAACTGATAACTCTGAGAAACTGAGTTGCATTATCAAAGGATTGATTTGGATTTCTTTTGCTGTTTCTTTGATCGTTCAAAGAGTAAAATGGATTAGAATATTAAACTCTATATGGTGGACATTTTCTTGTGTATTGGTTTCATCTCTCAACATTGAAGTTCTGTTAAAAAATCATGCAATTGAAACATTTGATATTATACAGTGGCTTGTACATTTCCTTCTTCTATGTTGTGCCTTCAAAAATCTTGACTATTTAGGAACTCATAGTGTCCAAGAAGGTTTAGCAGAGCCACTATTAGCTGAAAAAATTGAAACTAAACAAACAGGATTAGGCCATGCTACTTTTCTTAGCAAGCTGAATTTCTCTTGGATTAATTCTTTACTTAGTTTAGGTTACTCAAAGCCACTAGATCTTCAAGATATACCTTCCCTTGTTTCTGAAGATGAAGCTGACATGTCCTATCAAAAATTTCTTCATGCTTGGGAATCACTTGTAAGAGAGAGAACAAAGAATAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTAGAACCAACTTAAAAGAAAACATATTAATAGCATTTTATGCATTACTCAGAACTATTTCTGTTGTAGTTTCGCCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAGAACTGAGGCAGATCTTAAACAAGGTCTTTCCATAGTTGGTTTTCTGATTCTCACCAAATTGGTTGAGTCTTTATCTCAAAGGCATTGGTTTTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTTATGGTGGCGGTTTACCGAAAGCAGTTAAAGCTTTCTAGCTCGGCAAGGAAGAGACACTCGGCCGGTGAAATTGTGAATTACATTGCAGTTGATGCATACAGAATGGGAGAGTTTCCATGGTGGTTTCATACAACATGGACTTGTGCATTCCAACTTGTTCTTTCCATTGGTGTCCTTTTTGGTGTTGTAGGTATTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCAAGGATCCTACAAAATTGTCAGTCACAGTTTATGATTGCACAGGATGTACGTCTTCGATCAACTTTGGAGATTCTAAATAGTATGAAGATCATTAAGTTACAGTCATGGGAAGAAAAATTCAAGAACTTAGTTGAGTTGTTACGCGATAAAGAGTTTGTATGGTTGTCTAAGGCACAGATCCTGAAAGCTACTAATTCGTTTCTCTATTGGATGTCGCCTACAGTTATATCTGCTTTTGTTTTTGTTGGATGTGCTGTTACCAAGAGTGCACCATTAAATGCTGAAACCATTTTCACAGTTCTTGCAACATTGAGGAACATGGGAGAACCTGTTAGAATGATCCCTGAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCCTTAGATCGTCTTAGTAATTTTTTGCTCGATGAAGAACTAAACGATGATGATAGTGAAAGGAAATTAAAACAATTTTCGGTTAATGCTGTGGAGATTCAAGATGGAAACTTCATTTGGGATCATGAATCTGTATCTCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCACTTTTGTATGCAATACTTGGAGAGATTCCCAAGATTCAAGGAACTGTAAATGTAGGTGGAACTCTTGCCTATGTTTCTCAATCTTCTTGGATACAAAGTGGAACAGTTCAAGATAATATACTCTTCGGCAAGCCAATGGATAAAACAAGATATGAGAAAGCAATTAAAGCATGTGCCTTAGATAAAGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGAGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGACGATACTTTCAGTGCAGTTGATGCGCATACAGCTTCAATACTATTCAATGACTGTGTCATGACTGCTTTAAGAGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCTGAAGTTGATACTATCTTGGTAATGGAGGGTGGAAAAATTATACAATCAGGTAGTTATGAGAATCTCCTGACAGCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACACAATTACTGAGTTGAATCAAGATCATGAAAATAAAGGAGGTTCTGGAAATGAGGTTTTGGCTAAAACTCAAAGTGAGGGAGAGATTTCTAGTATCAAGGGTCCAATTGGAGCACAACTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCATTTTGGGATTATATTAACTATTCCAAAGGGACATTCATGCTATGTATGATCATTTTAGGACATTCTGTTTTTGTGGCTTTGCAGACTTCATCAACCTTTTGGCTTGCTATTGCCATTGAAATTCCAAAAGTCACTAATGCCACCTTGATTGGATTTTATGCATTAATTTCTCTTGCTAGTGCTGCTTTTGTTTATGTGAAGTCTTACTTGACTGCACTTTTGGGATTAAAAGCTTCAACTGCTTTTTTCTCAAGCTTTACGACTGCTATCTTCAATGCTCCTATGCTTTTCTTCGATTCAACTCCTGTAGGAAGGATTTTAACTAGAGCTTCATCAGATTTGAGTATATTGGACTTTGATATACCTTACTCCATCACCTTTGTAGCATGTGTAGCAATTGAAATTTTGGCGATAATTTGTGTAATGGCTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAGTATTCATTCAGGAATATTATCAAGCCACTTCAAGTGAATTAATACGGATCAACGGAACAACCAAAGCTCCAGTAATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGCAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGACAATGGAATGGGTGGTTTTAAGGATTGAAGCACTTCAAAATGTAACTGTCATCACTGCAGCTTTGTTGCTTATTCTACTTCCTCAGGGATATGTATCCCCAGGCCTTGTGGGACTATCTCTTTCATATGCTTTTACCCTGACCGGATCCCAAATATTTTGGAGTAGATGGTTTTCCAACTTATCAAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTAACATACCAGCTGAGCCTCCCGCCATTGTGGATAATAACCGACCACCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGCTTAGAAATTAGATATCGCCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTATTTTTAAAGAAGGAAGTAGGGTAGGAGTTGTTGGGAGGACTGGAAGTGGAAAAAGTACACTGATTAGTGCTTTGTTTCGATTAGTTGAACCTTCAAGAGGTGATATTCTCATAGATGGGATTAACATATGCTCAATCGGGTTGAAGGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGGAGCATTAGGACAAACCTGGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGTTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAAAGGCAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAAAATTCTTGTTCTGGATGAAGCTACAGCCTCCATTGACTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGAAGAATGTACTGTTATAACTGTGGCTCATAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTGATGGAATATGATGAACCTTCAAAGCTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGTTGCAGGAAGAATTCCTTTCAAACATTAGCCGGAAGCACGAACAAATACTGA 4380 0.3731 MAYFENTIGEISWICLKNFDFNSLCSQRSLIDTINILFVCVYYTSLIITLIRKSSTNGSHRKCWIFLIVSICCGAVSIAFFSIGLFNLIAKTDNSEKLSCIIKGLIWISFAVSLIVQRVKWIRILNSIWWTFSCVLVSSLNIEVLLKNHAIETFDIIQWLVHFLLLCCAFKNLDYLGTHSVQEGLAEPLLAEKIETKQTGLGHATFLSKLNFSWINSLLSLGYSKPLDLQDIPSLVSEDEADMSYQKFLHAWESLVRERTKNNTKSLVLWSIVRTNLKENILIAFYALLRTISVVVSPLILYAFVNYSNRTEADLKQGLSIVGFLILTKLVESLSQRHWFFNSRRSGMKMRSALMVAVYRKQLKLSSSARKRHSAGEIVNYIAVDAYRMGEFPWWFHTTWTCAFQLVLSIGVLFGVVGIGALPGLVPLLICGLLNVPFARILQNCQSQFMIAQDVRLRSTLEILNSMKIIKLQSWEEKFKNLVELLRDKEFVWLSKAQILKATNSFLYWMSPTVISAFVFVGCAVTKSAPLNAETIFTVLATLRNMGEPVRMIPEALSIMIQVKVSLDRLSNFLLDEELNDDDSERKLKQFSVNAVEIQDGNFIWDHESVSPTLRDVNLEIKWGQKIAVCGPVGAGKSSLLYAILGEIPKIQGTVNVGGTLAYVSQSSWIQSGTVQDNILFGKPMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDTFSAVDAHTASILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKIIQSGSYENLLTAGTAFELLVSAHKDTITELNQDHENKGGSGNEVLAKTQSEGEISSIKGPIGAQLTQEEEKVIGNVGWKPFWDYINYSKGTFMLCMIILGHSVFVALQTSSTFWLAIAIEIPKVTNATLIGFYALISLASAAFVYVKSYLTALLGLKASTAFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVACVAIEILAIICVMASVTWQVLIVAVPAMVASVFIQEYYQATSSELIRINGTTKAPVMNFAAETSLGVVTVRAFNMADRFFKNYLKLVDTDASLFFHSNVTMEWVVLRIEALQNVTVITAALLLILLPQGYVSPGLVGLSLSYAFTLTGSQIFWSRWFSNLSNYIISVERIKQFINIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCIFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRVIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLMEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSFQTLAGSTNKY* 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0557 1459 Gene3D - 1188 1439 IPR027417 -
Mal5g0557 1459 CDD ABC_6TM_ABCC_D2 887 1180 IPR044726 GO:0140359
Mal5g0557 1459 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 281 562 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0557 1459 SUPERFAMILY ABC transporter transmembrane region 876 1187 IPR036640 GO:0005524|GO:0016021
Mal5g0557 1459 Gene3D - 591 824 IPR027417 -
Mal5g0557 1459 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 99 1448 - -
Mal5g0557 1459 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 900 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0557 1459 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 99 1448 - -
Mal5g0557 1459 SUPERFAMILY ABC transporter transmembrane region 269 570 IPR036640 GO:0005524|GO:0016021
Mal5g0557 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 817 IPR027417 -
Mal5g0557 1459 CDD ABC_6TM_ABCC_D1 282 570 IPR044746 GO:0140359
Mal5g0557 1459 CDD ABCC_MRP_domain2 1203 1423 - -
Mal5g0557 1459 ProSitePatterns ABC transporters family signature. 721 735 IPR017871 GO:0005524
Mal5g0557 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1195 1438 IPR027417 -
Mal5g0557 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1439 IPR003439 GO:0005524
Mal5g0557 1459 CDD ABCC_MRP_domain1 596 796 - -
Mal5g0557 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 819 IPR003439 GO:0005524
Mal5g0557 1459 Gene3D ABC transporter type 1, transmembrane domain 249 585 IPR036640 GO:0005524|GO:0016021
Mal5g0557 1459 SMART AAA_5 623 796 IPR003593 -
Mal5g0557 1459 SMART AAA_5 1231 1416 IPR003593 -
Mal5g0557 1459 Pfam ABC transporter 1222 1370 IPR003439 GO:0005524
Mal5g0557 1459 Gene3D ABC transporter type 1, transmembrane domain 858 1186 IPR036640 GO:0005524|GO:0016021
Mal5g0557 1459 Pfam ABC transporter 614 748 IPR003439 GO:0005524
Mal5g0557 1459 Pfam ABC transporter transmembrane region 925 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0557 1459 Pfam ABC transporter transmembrane region 283 542 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0557 Mal-Chr5 8616216 8633875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0557 581 810 Calmodulin-binding Proteins AT2G36910 26.531 1.05e-19 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0557 - - gmx:100784827 2283.83