Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0554 ATGGATAAAACAAGATACGAGAAAGCAATTAAAGCATGTGCCTTAGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATTGTTCAGAGAGGGATAAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGACGATACTTTCAGTGCAGTTGATGCTCATACAGCTGCAATACTTTTCAATGACTGTGTCATGACTGCTTTAAGAGAGAAAACAGTGATTCTAGTTACTCATCAAGTGGAGTTTCTATCTGAAGTTGATACTATCTTGGTAATGGAAGGTGGAAAAGTTATTCAATCAGGTAGTTATGAAAATCTCCTGACAGCTGGAACAGCCTTTGAACTACTTGTGAGTGCACATAAGGACACAATTACTGAGTTGAATCAAGATCATGAAAATAAAGGAGGTTCTGAATTTGAGGTTTTGACTAAAAATCCTCAAGACTCTCATGGTTTTAATCTCACTAAAAATCAAAGTGAGGGAGAGATTTCTAGTATCAAGGGTCCAGTTGGTACACAGCTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATTGAAGCCATTTTGGGATTATATTAATTATTCCAAAGGGGCATCCATGTTTTGTTTCATCATGTTAGCACAATCTGGTTTTTTGGCTTTGCAGACTTCATCAACCTTTTGGCTTGCTATAGCCATTGAAATTTCAAAAGTAACTAATGCCACCTTGATTGGAGTTTACTCATTAATTTCTTTTTCTAGTGCTTCTTTTGTGTATTTAAGGTCTTACTTTACTGCACTTTTGGGATTAAAAGCTTCTACTGCTTTCTTCTCAAGCTTCACTACATCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATCACCTTTGTAGCATCTGTGGCAATTGAAATTTTATTGGTAATTTGTATAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCGATGGTTGGATCAATATACATTCAGAAATATTATGAAGCTGCTGCAAGGGAACTAATACGGATCAATGGAACCACCAAAGCTCCAGTTATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGTAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACTGTCATCACAGCAGCTTTGTTGCTTATTCTACATCCTCAGGGATATGTATCACCAGGCCTTGTGGGACTGTCTCTTTCTTATGCTTTTAATTTGACAGGAGCCCAAATATTTTGGACTCGATGGTTTAACAACTTATCAAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCTGAGCCTCCCGCCATTGTGGATAATAACCGACCACCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGCTTAGAAATTAGATATCGCCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTACTTTTAAAGAAGGAAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTGATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCGGCAGGTAATATTCTCATAGATGGGGTTAACATATGCTCAATCGGGTTGAAGGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGTAATATGGAAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGTTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAAAGGCAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTAGTTTTGGATGAAGCTACAGCCTCCATTGACTCTGCTACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTTGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTTTTATCTTATGGGAAACTGATGGAATATGATGAACCTTCAAAGCTAATGGACACAAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCTAGCTGCAGGAAGAATTCCTTCCAAACATTAGCAGGAAGCACCAATAAAGAATGA 2313 0.3792 MDKTRYEKAIKACALDKDINDFSHGDLTEIVQRGINMSGGQKQRIQLARAVYNDADIYLLDDTFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSGSYENLLTAGTAFELLVSAHKDTITELNQDHENKGGSEFEVLTKNPQDSHGFNLTKNQSEGEISSIKGPVGTQLTQEEEKVIGNVGLKPFWDYINYSKGASMFCFIMLAQSGFLALQTSSTFWLAIAIEISKVTNATLIGVYSLISFSSASFVYLRSYFTALLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVAIEILLVICIMVSVTWQVLIVAVPAMVGSIYIQKYYEAAARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWLVLRIEALQNLTVITAALLLILHPQGYVSPGLVGLSLSYAFNLTGAQIFWTRWFNNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSAGNILIDGVNICSIGLKDLRTKLSIIPQEPTLFKGSNMEEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLMEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSFQTLAGSTNKE* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0554 770 CDD ABC_6TM_ABCC_D2 215 508 IPR044726 GO:0140359
Mal5g0554 770 Gene3D ABC transporter type 1, transmembrane domain 185 514 IPR036640 GO:0005524|GO:0016021
Mal5g0554 770 SMART AAA_5 559 727 IPR003593 -
Mal5g0554 770 Gene3D - 517 625 IPR027417 -
Mal5g0554 770 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 1 759 - -
Mal5g0554 770 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 535 750 IPR003439 GO:0005524
Mal5g0554 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 133 IPR027417 -
Mal5g0554 770 Pfam ABC transporter 27 64 IPR003439 GO:0005524
Mal5g0554 770 Gene3D - 1 156 IPR027417 -
Mal5g0554 770 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 221 483 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0554 770 Pfam ABC transporter 550 681 IPR003439 GO:0005524
Mal5g0554 770 Pfam ABC transporter transmembrane region 219 478 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal5g0554 770 CDD ABCC_MRP_domain2 531 734 - -
Mal5g0554 770 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 759 - -
Mal5g0554 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 749 IPR027417 -
Mal5g0554 770 SUPERFAMILY ABC transporter transmembrane region 204 515 IPR036640 GO:0005524|GO:0016021
Mal5g0554 770 Gene3D - 626 754 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0554 Mal-Chr5 8604494 8608910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0554 531 748 Calmodulin-binding Proteins AT2G36910 30.000 2.31e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0554 - - gmx:100784827 1207.97