Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0508 ATGGCTTCTTCTTCTTCTTCTTCTTCATCTCACACCGCTGCTACAGTGCCTCTGAAGAAATATGATGTTTTCATCAGCTTTAGAGGCGAAGACACCCGCAGATTTTTTACAAGCCATCTTCACGCTGCTTTGGATCGAAACAAGCTTCATACCTACATTGACTACAGGATCCAAAAAGGAAAAGAGGTTTGGAAAGAACTTATTATAGCAATCCATGAATCCACTCTGTTTCTTGTTGTTTTCTCGGAGAACTACGCATCTTCAACATGGTGTTTAAACGAACTCGTACAAATAATGGAGTGTAGTAACAAAAATGAACAAGTTGTTGTTATTCCTGTGTTCTACCATGTTGATCCTTCACATGTGAGGAAGCAGACCGGGAGCTACGGCACTGCGTTGACTAAACACAAGAAGAAGGAAGGTAAAGACAATTTTCAAAAGTGGAATAATGCTCTTTTTGAGGCAGCTAATTTATCTGGTTTTCATTCTACCACCTACAGGACTGAATCTGACTTGATTGAAGACATTACGAAAGTTGTATTAGGAAAATTAAATCATAAGTACAGAAACGAGATTGCAACTAATTTCATACTCGATGAAAACTATTGGAGCATTGAATCTTTAATAAAAATTGATTCAACAAAAGTTCAAATCATTGGACTTTGGGGCATGGGAGGCATAGGTAAGACAACCCTTGCCGCTGCTATGTTTCACAAATTCTCTTTTCAGTATGAAGGCAGTTGCTTCTTTGAAAATGTGACAGAAGAATCAAAAAGGCATGGAATCAATCACACATGCAAAATACTTCTTTCTAAGTTACTAAAGGAAGATCTTGATATTGACACTCCCAAAGTAATACCATCCATGGTCATGAGAAGACTCAAACGCATGAAAGCTTTCATTGTATTAGATGATGTTCATACTTCAGAACTTCTACAAAACTTGATTGGAGTTGGGCATGGTTGGCTAGGAGCTGGAAGCACAGTCATTGTGACGACTAGGGATAAACATGTGCTGATAAGTGGAGGAATTGACAAAATTCATCAAGTTAAGAAAATGAACTCCCAAAACTCCCTCCAACTTTTCAGCTTGAATGCTTTTGACAAAGTCTTACCTAAGGAGGGATATGCGGAGCTCTCAAAAAGAGCAATTGATTATGCCAAAGGAAACCCTTTAGCTCTAAAAGTTATGGGATCATTTCTTCGTTGCAAAAGTGAAACAGAATGGAACTGTGCACTAGCTAAACTAATGGAAATTCCCAATGCAGAAATTGATAAGATACTGAGATGGAGTTTCAACGAATTGGATGATAAAGAGAAAAATATATTTCTAGACATTGCATGCTTTTTCAAAGGACAAAAAATGGATAGGATAACAAAAATATTAAATGAGTGTGGTTTCTTTGCAGACATAGGGATGAGACATCTTTTAGACAAGGCTCTTATAAGTGTTGACTTCGAAAATTGCATACAAATGCATGACTTGATCCAAGAAATGGGCAAACAAATTGTCCGTGAAGAATCTCTCAAGAATCCTGGACAACGAAGTAGATTGTGTGATCCTAAGGAAGTTTGTGATGTGTTGAAAAATAGTAGAGGAACAGAGATTGTTGAAGCCATATTTTTAGATGCCACTGAACTTAAACATATAAAATTAAGCCCCAAAGCATTTGAAAATATGCCAAACTTAAGGCTACTTGCTTTTCGAGACCATAAGGGAATTAAATCTGTAAGTATTCCTGGTGGGCTTGACTTATTTCCAGAAAATTTGAGATATTTTCTGTGGGATGGCTACCCATGGAAATCTCTGCCTCCAACCTTTTGTCCTGAAAAGCTTGTGGAGCTTTCTCTACCAGACAGCCATCTGGAAAAACTTTGGAATGGAGTACTGAATTTTCCAAATTTAGAGATACTTGACCTCCGTCGCTCCAAAAAGCTGATAGAATGTCCAAATGTGTCTGGTTCCCCAAATCTAAAACATGTAATGCTTAGTTATTGTAAAAGTTTGCCTGACGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTGAAAGTTTAAACGTGTTTGGATGCACGTCTCTTAAGAGCCTTTCCAGTAACACTTGTTCACCATCCCTCCTTGAATTGAATGCTTTGGAATGCATCAATCTCCAAGAGTTCTCAGTCCCATTTGCTTCCGTTGATCGTTTGTTTTTGGGTTTATCAAAGTGGGGTGGGAATGAACTTCCATCATCAATATTGCATACAAAAAATCTGGAAACCTTTTTCTTTCCTATCAGTGATAGTCTTGTGGATCTTCCTGAAAACTTTGCCAATAGTATTTGGCTTGTGAGTCCACTGAATCGTGAACATGACCCTTTCACCACCTTATATAAAGTACTTCCTAGTCCTGCCTTCCTGAGTGTAAAACACTTAATCTTTGTTGATATTCCTATCTTGTCTGAAATCCCAAACAATATCTCCTTACTTTCGTCATTAGAGTCTTTAACACTGGCTGGCTTGTCCTAA 2505 0.378 MASSSSSSSSHTAATVPLKKYDVFISFRGEDTRRFFTSHLHAALDRNKLHTYIDYRIQKGKEVWKELIIAIHESTLFLVVFSENYASSTWCLNELVQIMECSNKNEQVVVIPVFYHVDPSHVRKQTGSYGTALTKHKKKEGKDNFQKWNNALFEAANLSGFHSTTYRTESDLIEDITKVVLGKLNHKYRNEIATNFILDENYWSIESLIKIDSTKVQIIGLWGMGGIGKTTLAAAMFHKFSFQYEGSCFFENVTEESKRHGINHTCKILLSKLLKEDLDIDTPKVIPSMVMRRLKRMKAFIVLDDVHTSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLISGGIDKIHQVKKMNSQNSLQLFSLNAFDKVLPKEGYAELSKRAIDYAKGNPLALKVMGSFLRCKSETEWNCALAKLMEIPNAEIDKILRWSFNELDDKEKNIFLDIACFFKGQKMDRITKILNECGFFADIGMRHLLDKALISVDFENCIQMHDLIQEMGKQIVREESLKNPGQRSRLCDPKEVCDVLKNSRGTEIVEAIFLDATELKHIKLSPKAFENMPNLRLLAFRDHKGIKSVSIPGGLDLFPENLRYFLWDGYPWKSLPPTFCPEKLVELSLPDSHLEKLWNGVLNFPNLEILDLRRSKKLIECPNVSGSPNLKHVMLSYCKSLPDVDSSIFLLQKLESLNVFGCTSLKSLSSNTCSPSLLELNALECINLQEFSVPFASVDRLFLGLSKWGGNELPSSILHTKNLETFFFPISDSLVDLPENFANSIWLVSPLNREHDPFTTLYKVLPSPAFLSVKHLIFVDIPILSEIPNNISLLSSLESLTLAGLS* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0508 834 Gene3D - 18 188 IPR035897 -
Mal5g0508 834 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 831 - -
Mal5g0508 834 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 161 IPR035897 -
Mal5g0508 834 SMART till_3 20 158 IPR000157 GO:0007165
Mal5g0508 834 Pfam TIR domain 20 190 IPR000157 GO:0007165
Mal5g0508 834 Pfam NB-ARC domain 206 428 IPR002182 GO:0043531
Mal5g0508 834 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 831 IPR044974 GO:0006952
Mal5g0508 834 Gene3D Ribonuclease Inhibitor 505 729 IPR032675 -
Mal5g0508 834 Gene3D - 352 436 IPR042197 -
Mal5g0508 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 446 IPR027417 -
Mal5g0508 834 Gene3D - 189 343 IPR027417 -
Mal5g0508 834 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Mal5g0508 834 Pfam Leucine Rich Repeat 611 629 IPR011713 -
Mal5g0508 834 SUPERFAMILY L domain-like 491 832 - -
Mal5g0508 834 PRINTS Disease resistance protein signature 387 401 - -
Mal5g0508 834 PRINTS Disease resistance protein signature 630 646 - -
Mal5g0508 834 PRINTS Disease resistance protein signature 293 307 - -
Mal5g0508 834 PRINTS Disease resistance protein signature 218 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0508 Mal-Chr5 7703598 7707687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0508 19 828 WRKY Transcription Factor Family AT4G12020 32.727 2.43e-99 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0508 - - mtr:MTR_8g018480 1265.37