Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0505 ATGGCGACACCGGGAGCCGGAATGTTAGACGGTGGCGTACCGACGGTGCAACCACCGGGAACTGACATGACCGGAATATGCTTCAGAGATCAATTATGGCTAAACACATACCCACTCGATCGTAACCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCAAACAACGAACAACTTCGAATGCGTTCTCATCATCCACTCGATCCCTCTCAACTCACGAAAATGATTGGTGTAGAGTATGTGTTGAGTGAAGTTATGGAGCCTCATCTTTTTATTATGAAGAAGCAGAAGAGGGATAGTCCTGATAAAGTTACTCCAATGCTTGCTTATTACATTTTGGATGGTTCAATTTATCAAGCTCCACAATTATCCAATGTTTTTGCTGCTAGAATTGGAAGGGCACTATATTATATTGAAAAGGCATTTACTACAGCTGCATCTAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTACAATTCCAGAACCAAAGGCGGCTAAGGAGACAATTGACTTAAAAGAAATTAAGCGAGTGGATCATATTCTTGCTTCCTTGCAACGCAAGCTTCCACCTGCTCCACCTCCGCCAGCATTTCCAGAAGGGTATGTTCCACCTTCAACAGCAGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAGCTGAGTCACTAGCACCTACTGTTGATCCCATACTTGATCAAGGACCTGCAAAAAGAATGAAATTTTGA 747 0.4297 MATPGAGMLDGGVPTVQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSHHPLDPSQLTKMIGVEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKAAKETIDLKEIKRVDHILASLQRKLPPAPPPPAFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMKF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0505 248 MobiDBLite consensus disorder prediction 195 248 - -
Mal5g0505 248 PIRSF MED6_meta/plant 12 248 IPR016820 GO:0003712|GO:0006357|GO:0016592
Mal5g0505 248 Pfam MED6 mediator sub complex component 26 151 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mal5g0505 248 Gene3D Mediator complex, subunit Med6 20 149 IPR038566 -
Mal5g0505 248 PANTHER MED-6-RELATED 13 248 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mal5g0505 248 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 13 248 - -
Mal5g0505 248 MobiDBLite consensus disorder prediction 195 209 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Mal5g0505 Med6 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0505 K15128 - gmx:100792248 412.535